Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1993 ATGGATGATGGAGATATTCAGCTTTCAGATAATGCTATGTTGTTGAATCCAAAACCATCCGGTGATTTCCAGGTTTTAACTTGCACACACACTCACACTTGCAATCCTCCTGGCCCAAATTCTGTACGTACACATACATGCTATCACACTCACACACAAGTTTTTGCATCAGAAGAAGATGACAAAGAGAAAACTAAATCAAAGGCAAGAAGGCCTTCAAGTAACAAAGAAGCAGTTAGAAAGTATAGGGAGAAGAAGAAGGCACATGCGGCCTATTTGGGGGAGGAACTCGAAAGATTGCGCCTGCAGCATGTGCAACTAGTCAGAAAACTGCAGAAGCAGGCGATTCTTGAGGCAGAGCTTTCGAGGTTGAGAAGCATTTTGATAGATATTAGGACGAAAATTGACAATGAACTAGGTGTTTTCCCTTATAAGAAGCAGTGTACCTCTCATGGCCAGACCAGTTTCCCATGCTTCAATAGTTTACATGCAGGATCATCATCTCAGGTTGCTATACATGGAAATGGTAAATTTTCAGCTAGATGGGAAGGAAACTGTCAGCCTGCCATGGTAAACTGTCAAGTAAACGAAGAAAAGAAGGCAAGTACTAAAGAAGAAGGAGAAGAAGAAAGCATTGAAGGCGATGGATAA 651 0.4178 MDDGDIQLSDNAMLLNPKPSGDFQVLTCTHTHTCNPPGPNSVRTHTCYHTHTQVFASEEDDKEKTKSKARRPSSNKEAVRKYREKKKAHAAYLGEELERLRLQHVQLVRKLQKQAILEAELSRLRSILIDIRTKIDNELGVFPYKKQCTSHGQTSFPCFNSLHAGSSSQVAIHGNGKFSARWEGNCQPAMVNCQVNEEKKASTKEEGEEESIEGDG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1993 216 Pfam Basic region leucine zipper 66 120 IPR004827 GO:0003700|GO:0006355
Acco08g1993 216 CDD bZIP 68 122 - -
Acco08g1993 216 PANTHER CCAAT/ENHANCER BINDING PROTEIN 24 143 IPR031106 GO:0003700|GO:0006351
Acco08g1993 216 MobiDBLite consensus disorder prediction 56 83 - -
Acco08g1993 216 SMART brlzneu 63 130 IPR004827 GO:0003700|GO:0006355
Acco08g1993 216 MobiDBLite consensus disorder prediction 197 216 - -
Acco08g1993 216 SUPERFAMILY Leucine zipper domain 68 113 IPR046347 GO:0003700|GO:0006355
Acco08g1993 216 Gene3D - 55 130 - -
Acco08g1993 216 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1993 Acco-ChrAcco08 34105501 34106151 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1993 28 146 bZIP Transcription Factor Family AT4G35040 55.118 4.03e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco08g1993 bZIP_2 8.1e-08 CL0018