Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1983 ATGGCAAAGAGGAAGAGCTGGTTTGGTTTTGTGAAGAAGCTCTTTGTATGGGACACACAGTCCAAACCAGAGAAGAAAGAGAAAAGAAGGAAATGGATGTTTGGAATTGGAAGGTTAAAGATAAAGAGACTACCTTCTATTACAGCTCCACCAGCAACAATAAAAGAAACAAAACAAGAGGTTGAGAAGCTCAATAATGGCAATCAATGTCACGATGAAACTGAAGAATTACAAGTTGTCAAGTCCAGAATTGAGGCTCCTCAACCCACCTTACAATGCCAAAGGAAGATTCAAGAATCTTCCGCCATCAAAATTCAAACTACATTTAAGGGTTACCTTGCAAGGAAGGCTCTAAGGGCATTGAAGGGAATAGTGAAGCTACAAGCTCTCATTAGAGGCAGAGCAGTAAGACGCCAAACTATGAGTACTCTGAAGTGCTTGCAGTCACTTGTTGATATCCAGTTACAGGTCTGTGCCAAGAGACTCCAGATGGCTAAAGGAAGATGGGATTTTGATGAGAACCAAGAGATTCCAAGTTCAAGAGACAAAATCATAAGGATGGATTCAGACAGTGAAAAGAGGTGGGATGACAGCATTTTGTTAAAGGAAGAGACAGATGCTTTTTACATGAGCAAGAGAGAAGCAGAAGTTAAGAGAGAAAGAATGAAAGAATACTCATTCAACCATCGAAGATCAGCAGAATCAGAGAGAAACAAGGTAAATGGAAGATGGAGGTATTGGATGGAGCAGTGGGTAGATACCCAACTTTCTAAAAGTAAAGAACTTGAAGATTTAGACTCAGTCTTCAGTTCACATTACAGAGCAAGAGAAGAATATGTAGAAGGAGGAGGAGGAAGACAGCTTCATCTGAGAAATATTCCGAGCCAAAGACAAAATCAGATTGAAGGCTTATATTCTCCAAAACTTGCTCCAATAAGAAAACCTTCTCCTCACAGAAGGCAACATTCTCTGGGAAATGATGAGCCTTCAAGGCCTTCTGTACTTCCAACATACATGGCAGCTACAGAATCAGCAAGAGCAAAAGCAACAAGGTCTTCAAGCTCCCCAAGACTAAGAACAGTGAATGTGGTTGATACAACAAAACTTGATGGAAACTCACCATGCAAAAAGAAGCTATCTTTTGTATCTTCTTCCATTAACCAGCAAAGATCTCCAAGTTTAAAGGGAATCTCAGGACCTATAAGATCAAGCAGGACAATGAAGGACCTCAGCATAAACTCAGATAGCTCATTTCTGTACGGATACAACTGA 1272 0.4041 MAKRKSWFGFVKKLFVWDTQSKPEKKEKRRKWMFGIGRLKIKRLPSITAPPATIKETKQEVEKLNNGNQCHDETEELQVVKSRIEAPQPTLQCQRKIQESSAIKIQTTFKGYLARKALRALKGIVKLQALIRGRAVRRQTMSTLKCLQSLVDIQLQVCAKRLQMAKGRWDFDENQEIPSSRDKIIRMDSDSEKRWDDSILLKEETDAFYMSKREAEVKRERMKEYSFNHRRSAESERNKVNGRWRYWMEQWVDTQLSKSKELEDLDSVFSSHYRAREEYVEGGGGRQLHLRNIPSQRQNQIEGLYSPKLAPIRKPSPHRRQHSLGNDEPSRPSVLPTYMAATESARAKATRSSSSPRLRTVNVVDTTKLDGNSPCKKKLSFVSSSINQQRSPSLKGISGPIRSSRTMKDLSINSDSSFLYGYN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1983 423 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Acco08g1983 423 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
Acco08g1983 423 PANTHER IQ-DOMAIN 5-RELATED 1 382 - -
Acco08g1983 423 Pfam IQ calmodulin-binding motif 100 119 IPR000048 GO:0005515
Acco08g1983 423 MobiDBLite consensus disorder prediction 382 402 - -
Acco08g1983 423 Pfam Protein of unknown function (DUF4005) 319 390 IPR025064 -
Acco08g1983 423 SMART iq_5 120 141 IPR000048 GO:0005515
Acco08g1983 423 SMART iq_5 97 119 IPR000048 GO:0005515
Acco08g1983 423 Gene3D - 96 148 - -
Acco08g1983 423 MobiDBLite consensus disorder prediction 280 334 - -
Acco08g1983 423 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1983 Acco-ChrAcco08 33980099 33982695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1983 1 418 IQD Protein Family AT5G13460 44.156 3.45e-98 299