Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1971 ATGGATTTGTTGGATTCGAAAGAAAAACCAAAAACTGTGAAAGAAGAAGAAAACGACGACGTTGATTCGTCTGTTCTTTCTGCGTTTCGTCTTCGCAGTAGCCAGATCTTCTCTGCAGCTCTGAACGCTGCCATTGAACTCAACTTGTTCGACTTCATCGCTGAGGAAGGAGGAAGACACGTGTCATCTTCTGAAGTGGCCTGTCGGCTTCCAAGTTCGTGTCAGCACAGAGACTTGGCTTCCAGAATCGATCGTATCTTGAGGCTTCTCGCCAGTCACTCTCTTCTCGATTGCAGGGTTTGTGAGAAGAAGGAAGAAGAAAAAGATGGTTCCACTGAGAGACTGTATGCCCTTTCTTCCATTGGCCGGCATTTTGTGAGTGGATCCTTGGGATTCGTACCAATCTTTTCTCATCCTGCACTTGTGCAAGCATGGATCAACTTCAAGGATGCAATAATAGATGAAGACAACGATTTGTTCAAGAAGGTTCATGGAATGCCAATGTACCAATACGCAAAGACTGATCCAACATGGAATAAAACTTTCAACAAAGCAATGGCCAATGTTTGCAGTCTGGAGATGAAAAGGATTCTGGAAATATACAAAGGATTTGAGGGAATATCAACGATTGTTGATGTTGGAGGAGGCACTGGTCAAAACCTTAAAATGATTGTCTCTAAGTATCCTTCGATTAAGGGTGTCAATTTTGATTTGCCCCAAGTCGTTCAAAATGCACATTCCATTCCAGGGATTGAACACGTTGGAGGAGATATGTTTGAAAGTGTTCCTAAAGGTGATGCCATGATATTGAAGGCTGTATGTCACAATTGGTCTGATGAAAATTGCATAAAAGTGTTGAAGAAATGTCATGAATCATTACCAGAAAAAGGGAAGGTGATGGTGGTGGAGTTTATAATGCCTGAAGCAAATATGGCAACAGAAGAAGCCAAGTATGTGTCAATCTTGGACAACCTCATGTTCCTTCATGATGGAAGAGAAAGAACTGAGAAAGAGTTTGAATCTCTTTGCAAAAATTCTGGATTTTCAAGCTTCAAAGTTGCTTGTCGTGTTTTTTCTGCTTTAGGAGTCATGGAATTTTGCAAATAA 1107 0.4128 MDLLDSKEKPKTVKEEENDDVDSSVLSAFRLRSSQIFSAALNAAIELNLFDFIAEEGGRHVSSSEVACRLPSSCQHRDLASRIDRILRLLASHSLLDCRVCEKKEEEKDGSTERLYALSSIGRHFVSGSLGFVPIFSHPALVQAWINFKDAIIDEDNDLFKKVHGMPMYQYAKTDPTWNKTFNKAMANVCSLEMKRILEIYKGFEGISTIVDVGGGTGQNLKMIVSKYPSIKGVNFDLPQVVQNAHSIPGIEHVGGDMFESVPKGDAMILKAVCHNWSDENCIKVLKKCHESLPEKGKVMVVEFIMPEANMATEEAKYVSILDNLMFLHDGRERTEKEFESLCKNSGFSSFKVACRVFSALGVMEFCK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1971 368 FunFam Caffeic acid O-methyltransferase 125 368 - -
Acco08g1971 368 SUPERFAMILY "Winged helix" DNA-binding domain 21 128 IPR036390 -
Acco08g1971 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 356 IPR029063 -
Acco08g1971 368 FunFam Caffeic acid 3-O-methyltransferase 5 125 - -
Acco08g1971 368 Gene3D Vaccinia Virus protein VP39 129 368 IPR029063 -
Acco08g1971 368 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Acco08g1971 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 368 IPR016461 GO:0008168
Acco08g1971 368 Gene3D - 6 125 IPR036388 -
Acco08g1971 368 CDD AdoMet_MTases 209 306 - -
Acco08g1971 368 PANTHER O-METHYLTRANSFERASE 31 351 IPR016461 GO:0008168
Acco08g1971 368 Pfam O-methyltransferase domain 145 349 IPR001077 GO:0008171
Acco08g1971 368 PIRSF O-mtase 5 368 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1971 Acco-ChrAcco08 33798550 33808245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1971 22 358 Monolignol Biosynthesis Gene Families AT5G54160 46.221 6.94e-105 311