Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1970 ATGGCTTTGCTGGATTCCAAAACGAAACAAAACGATGAGATGCCAAAAACTGAGAGCGAAGAGGAAAAAGACGACGACGTTGATTTGTCAGTGCTTTCAGCGTTTCGTCTTTGCAGTACCCAGCTCTTCTCTGCAGCTCTGAACGCTGCAATAGAGCTCAAATTGTTCGACATCGTCGCTGAAGAAGGAGGAAGACACGTGTCAGCTTTTGAAGTGGCTTCTCGGCTTCCAAGTTCATATGAGCACAGAGACTTGGCTTTCAGAATCGATCATCTCTTGAGGGTTCTTGCGAGCCACTCTCTTCTCAATTGTACGGTTCGTCAGAAGAAAGAAGAAAAAGATGGTTCCACTGAGAGACTCTATGCCCTTTCTTCTATTGGCAGGCACTGTATGAGTGGATCTTTGGGATTCGTTCCAATCTTCTGTCATCCTGCACTCAGGAAAAGCTTTAGTTGGACGACTTCTAAGAAAAATTTCAAATTTTGTAAAGGGATTGAACATGTTGGAGGAGATATGTTTGAAAGTGTTTCAAAAGGTGATGCTATGATATTAAAGGCAACAGAAGAAGCTCAGTTTGTATCAATGTTGGACAACCTCATGTTTCTTCATGATGGAAGAGAAAGAACCGAGAAAGAGTTTGAGTCTCTTTGCAAAATGTCTGGATTTTCAAGCTTTGAAGTTGCTTGTCGTATTTTTAATGCTTTAGGAGTCATGGAATTTCGCAAATAA 729 0.4156 MALLDSKTKQNDEMPKTESEEEKDDDVDLSVLSAFRLCSTQLFSAALNAAIELKLFDIVAEEGGRHVSAFEVASRLPSSYEHRDLAFRIDHLLRVLASHSLLNCTVRQKKEEKDGSTERLYALSSIGRHCMSGSLGFVPIFCHPALRKSFSWTTSKKNFKFCKGIEHVGGDMFESVSKGDAMILKATEEAQFVSMLDNLMFLHDGRERTEKEFESLCKMSGFSSFEVACRIFNALGVMEFRK 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1970 242 Pfam Dimerisation domain 46 97 IPR012967 GO:0046983
Acco08g1970 242 Gene3D - 10 129 IPR036388 -
Acco08g1970 242 PANTHER O-METHYLTRANSFERASE 38 134 IPR016461 GO:0008168
Acco08g1970 242 SUPERFAMILY "Winged helix" DNA-binding domain 31 131 IPR036390 -
Acco08g1970 242 MobiDBLite consensus disorder prediction 1 25 - -
Acco08g1970 242 Gene3D Vaccinia Virus protein VP39 186 230 IPR029063 -
Acco08g1970 242 FunFam Caffeic acid 3-O-methyltransferase 9 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1970 Acco-ChrAcco08 33764630 33768537 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1970 19 129 Monolignol Biosynthesis Gene Families AT1G77530 31.858 1.41e-11 61.2