Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1965 ATGGTTCTCAAGACAGAGCTCTGTCGTTTTAGTGGGGGCAAGATCTACCCTGGGAAGGGCATCAGATTTGTTCGTGGTGATTCTCAGGTCTTTTTGTTTTCCAATTCAAAATGCAAGAGGTACTTTCACAACAGACTGAAACCTTCAAAGCTCACCTGGACTGCCATGTACAGGAAGCAACACAAGAAGGACATTGCCCAAGAAGCTGTTAAGAAGAGGCGTCGCACCACCAAAAAGCCTTACTCTAGGTCTATTGTTAGTGCTACTCTGGAAGTTATCCAGAAGAAAAGAACTGAGAAACCAGAGGTTCGAGATGCTGCCAGAGAAGCCGCTCTCCGTGAGATTAAGGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAAGCAGAGATGGCCAAGACACAAAAAGCACAAGGAAAAGGAAATGTTCCTAAGGGTGCTGCCCCCAAAGGTCCTAAACTTGGTGGAGGCGGTGGAAAGCGCTGA 492 0.4654 MVLKTELCRFSGGKIYPGKGIRFVRGDSQVFLFSNSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVSATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEMAKTQKAQGKGNVPKGAAPKGPKLGGGGGKR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1965 163 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Acco08g1965 163 FunFam 60S ribosomal protein L24 3 64 - -
Acco08g1965 163 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Acco08g1965 163 PANTHER 60S RIBOSOMAL PROTEIN L24 4 152 IPR000988 -
Acco08g1965 163 SMART 4TRASH 8 46 IPR011017 -
Acco08g1965 163 Coils Coil 112 139 - -
Acco08g1965 163 MobiDBLite consensus disorder prediction 117 136 - -
Acco08g1965 163 MobiDBLite consensus disorder prediction 117 163 - -
Acco08g1965 163 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Acco08g1965 163 Gene3D - 69 138 - -
Acco08g1965 163 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Acco08g1965 163 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Acco08g1965 163 MobiDBLite consensus disorder prediction 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1965 Acco-ChrAcco08 33658535 33660075 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1965 1 156 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 85.350 1.74e-86 249