Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1962 ATGGCTTCTGCCTACCTTTTCAAGTTCACAGCCTTCCTCTTCATTGCCCTCGTCCTTTTCTCTCCCAACGAGAAAAACGTTGCAGAAGCAAAACTGTGTGGGAAACTGAGCTCAACATTTTCTGGGATTTGTATACGAGATTGTCCATGTGATGCTAAATGCTTAAGAGAGGGTGCTGCTTCTGGAAGCTGTCATTTTCATAAAGGTGGACGTGCTTGCTTCTGCTATCGCAAATGCTGA 240 0.45 MASAYLFKFTAFLFIALVLFSPNEKNVAEAKLCGKLSSTFSGICIRDCPCDAKCLREGAASGSCHFHKGGRACFCYRKC 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1962 79 SUPERFAMILY Scorpion toxin-like 30 79 IPR036574 -
Acco08g1962 79 CDD Knot1 42 76 IPR003614 GO:0006952
Acco08g1962 79 Gene3D - 30 79 IPR036574 -
Acco08g1962 79 Pfam Gamma-thionin family 32 79 - -
Acco08g1962 79 PANTHER DEFENSIN-LIKE PROTEIN 1 8 79 - -
Acco08g1962 79 SMART gth_4 32 79 IPR003614 GO:0006952
Acco08g1962 79 ProSitePatterns Gamma-thionins family signature. 31 54 IPR008176 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1962 1 79 Plant Defensins Gene Families AT1G19610 37.500 6.12e-11 51.2