Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1955 ATGTTTGTTGTTTGGTGGAAGGGTTGGGTTTCTCTGAAAAGCAGGAATCCAGCCGAAACTGCAGCAGCCGCTATGGTTCTGAAGACGGAGCTCTGTCGCTTTAGTGGGGGCAAGATCTACCCTGGGAAGGGCATTAGATTTGTTCGTGGTGATTCCCAGGTGTTTTTGTTTGCCAACTCAAAATGCAAGAGGTACTTTCACAACAGATTGAAGCCATCAAAGCTCACCTGGACTGCCATGTACAGGAAGCAACACAAGAAGGACATTGCCCAGGAGGCTGTGAAGAAGAGGCGTCGCACCACCAAAAAGCCTTACTCTAGGTCTATTGTTGGTGCTACGTTGGAAGCTATTCAGAAGAAAAGAACTGAGAAACCAGAGGTTCGAGATGCTGCTAGAGAAGCTGCTCTTCGCGAAATTAAAGAGAGGATCAAGAAAACAAAGGATGAGAAGAAGGCAAAGAAGGCAGAAGTGATGGCCAAGACACAAAAAGCACAAGGAAAGGGAAACTTTCCCAAGGGTGCTGCCCCTAAAGGTCCTAAGCTTGGTGGAGGTGGTGGGAAGCGCTGA 567 0.4815 MFVVWWKGWVSLKSRNPAETAAAAMVLKTELCRFSGGKIYPGKGIRFVRGDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEAIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAEVMAKTQKAQGKGNFPKGAAPKGPKLGGGGGKR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1955 188 Pfam Ribosomal protein L24e 28 91 IPR000988 -
Acco08g1955 188 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 30 82 - -
Acco08g1955 188 Gene3D Ribosomal protein L24e 27 88 IPR038630 -
Acco08g1955 188 Coils Coil 136 163 - -
Acco08g1955 188 SMART 4TRASH 32 70 IPR011017 -
Acco08g1955 188 MobiDBLite consensus disorder prediction 141 160 - -
Acco08g1955 188 FunFam 60S ribosomal protein L24 27 88 - -
Acco08g1955 188 Gene3D - 93 164 - -
Acco08g1955 188 ProSitePatterns Ribosomal protein L24e signature. 34 51 IPR023442 -
Acco08g1955 188 CDD Ribosomal_L24e_L24 27 80 IPR000988 -
Acco08g1955 188 PANTHER 60S RIBOSOMAL PROTEIN L24 28 174 IPR000988 -
Acco08g1955 188 MobiDBLite consensus disorder prediction 141 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1955 Acco-ChrAcco08 33546266 33550306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1955 25 181 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 84.713 6.01e-87 251