Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1950 ATGGCACTCATCAATCAAGAGGTCGAAGCTCTCACAACTGCTCTCTCAGGGATTGGAATTGATGAGAAATCGGTAATATCAATATTGGGAAAATGGGAACCAAACGAAAGAGAAGTTTTCAGAGAAGCAAATGCCGACTTCTTCATAAAAGATGAACGTAACTTTCACAAGTGGAACGATCACTGGGTTCGTCTTCTCAAGCATGAATTTATGCGTATCAAGAATGCGGTGGTGCTACTCGCGATGCATCCGTGGGAAAGAGACGCGCGGCTAGCGAAGGAGGCATTGAAGAAGGGTTCACAGGCGTACGGAGTGTTTGTTGAGATCGCCTGCAGCAGATCCTCTGATCAACTCTTGGGAGCGAGAAAGGCTTACCATGCCCTCTTTGACCACTCCTTTGAGGAGGAACTCGCTACTCATGTCCCCACCAATGAACGCAAGCTGTTAGTTGCATTAGTGAGTGCATATAGATATGAAGGCTCAAAGGTGAAAGATGAGGATGCCGAACATGAAGCCCAAGATATTTTCAACATAATTAAGAATAATGGGCCGAACAAGCCCATTATTGAAAATGATGAAATCATAAGGATTCTATCAACAAGAAGCAAGCTCCACATTCAAGCCATCTACAAATATTACCACAAGATATCTGGCAGTTACCTTGATGAGGATCTTAAGGATATTAGGTTGAAAGAGACTATGCGATGCCTTTGCGCTCCTCATACCTACTTTGCTGAGGTTTTGGAGGGAGCAATGAGAAGTGAAGATAAGAATATAAATAAGGGATTGACTCGTGTGATTGTTACTCGAGCAGATATAGATATGCCCAAAATCAAAGAAGAGTACCAAAAGTTGTATGGAGCATCTTTATCCGAGAAAATTGCTGATGTGGCAAAGGGAAATTATAAGGATTTCTTGCTAGCTTTGATTACAAGAGAAAAATAA 945 0.4212 MALINQEVEALTTALSGIGIDEKSVISILGKWEPNEREVFREANADFFIKDERNFHKWNDHWVRLLKHEFMRIKNAVVLLAMHPWERDARLAKEALKKGSQAYGVFVEIACSRSSDQLLGARKAYHALFDHSFEEELATHVPTNERKLLVALVSAYRYEGSKVKDEDAEHEAQDIFNIIKNNGPNKPIIENDEIIRILSTRSKLHIQAIYKYYHKISGSYLDEDLKDIRLKETMRCLCAPHTYFAEVLEGAMRSEDKNINKGLTRVIVTRADIDMPKIKEEYQKLYGASLSEKIADVAKGNYKDFLLALITREK 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1950 314 Gene3D Annexin 83 150 IPR037104 GO:0005509|GO:0005544
Acco08g1950 314 SUPERFAMILY Annexin 6 311 IPR037104 GO:0005509|GO:0005544
Acco08g1950 314 ProSiteProfiles Annexin repeat profile. 239 311 IPR018502 GO:0005509|GO:0005544
Acco08g1950 314 ProSiteProfiles Annexin repeat profile. 83 154 IPR018502 GO:0005509|GO:0005544
Acco08g1950 314 FunFam annexin D4 242 311 - -
Acco08g1950 314 Gene3D Annexin 243 313 IPR037104 GO:0005509|GO:0005544
Acco08g1950 314 PRINTS Annexin family signature 253 273 IPR001464 GO:0005509|GO:0005544
Acco08g1950 314 PRINTS Annexin family signature 179 205 IPR001464 GO:0005509|GO:0005544
Acco08g1950 314 PRINTS Annexin family signature 16 38 IPR001464 GO:0005509|GO:0005544
Acco08g1950 314 PRINTS Annexin family signature 281 296 IPR001464 GO:0005509|GO:0005544
Acco08g1950 314 PANTHER ANNEXIN 6 309 - -
Acco08g1950 314 SMART annex3 190 237 IPR018502 GO:0005509|GO:0005544
Acco08g1950 314 SMART annex3 260 309 IPR018502 GO:0005509|GO:0005544
Acco08g1950 314 SMART annex3 103 152 IPR018502 GO:0005509|GO:0005544
Acco08g1950 314 FunFam Annexin 83 152 - -
Acco08g1950 314 Pfam Annexin 87 152 IPR018502 GO:0005509|GO:0005544
Acco08g1950 314 Pfam Annexin 191 227 IPR018502 GO:0005509|GO:0005544
Acco08g1950 314 Pfam Annexin 243 309 IPR018502 GO:0005509|GO:0005544
Acco08g1950 314 FunFam annexin D4 153 241 - -
Acco08g1950 314 Gene3D Annexin 151 242 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1950 Acco-ChrAcco08 33468775 33475576 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g1950 08 33468775 33475576 Acco08g1950 08 33468775 33475576 ECH