Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1917 ATGGGTATGGCTGTAGAGACCCAGTTTCATGTTTTGGCTGTTGATGACAGTCTCATTGACAGAATGTTGATTGAGAGGCTCCTCAAGACCTCATCCTTCCAAGTTACAGCAGTGGATTCTGGAAGTAAGGCTTTGAAGTTTCTTGGTTTAAATGAAGATGAACAGAGAAAAGCCGATAGAGTCTCTGTTGATTCTAATAGCCATCAGGATTTAGAGGTGAACCTGATCATAACAGATTACTGTATGCCAGGAATGACAGGCTATGATCTACTGAGAAAAATCAAGGAATCTGAATTTCTCAAAAACATACCAGTGGTAATTATGTCCTCAGAGAATGTCCCATCAAGGATCAACAGATGCTTAGAAGAAGGAGCTCAAGAATTTTTCCTGAAACCTGTTCAACAGTCAGATGTAAACAAGCTCAAGCCACATTTGATGAAATCAAAACTTAAGGAAGAGGAAGACCAATTGATCAATAACAAAAGGAAGGACATGGAAGAAGAAACCCATTCACCAGATAGAACCAGAGCAAAAATATAG 540 0.3926 MGMAVETQFHVLAVDDSLIDRMLIERLLKTSSFQVTAVDSGSKALKFLGLNEDEQRKADRVSVDSNSHQDLEVNLIITDYCMPGMTGYDLLRKIKESEFLKNIPVVIMSSENVPSRINRCLEEGAQEFFLKPVQQSDVNKLKPHLMKSKLKEEEDQLINNKRKDMEEETHSPDRTRAKI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1917 179 CDD REC_typeA_ARR 11 141 - -
Acco08g1917 179 Coils Coil 147 167 - -
Acco08g1917 179 SUPERFAMILY CheY-like 8 146 IPR011006 -
Acco08g1917 179 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Acco08g1917 179 Gene3D - 10 178 - -
Acco08g1917 179 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Acco08g1917 179 SMART REC_2 9 145 IPR001789 GO:0000160
Acco08g1917 179 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 160 IPR045279 GO:0009736
Acco08g1917 179 MobiDBLite consensus disorder prediction 150 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1917 Acco-ChrAcco08 32650870 32651990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1917 1 154 Response Regulator Gene Family AT3G57040 68.293 1.21e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco08g1917 Response_reg 9.8e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g1917 08 32650870 32651990 Acco01g2828 01 45406592 45409448 CCT