Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1898 ATGGAGAGCTGCCTACTTGACCTTGCAAAGAATGAAGTCCAAAGTTTGGTGAATCTAGTGAAAAATGAGGCTCAATATCTATGTTGTTTCAAAAATTATGTTGAAAATTTTGAGCAGAAAAAGAACATACTAGCAGCAAAGCAGAAGGATGTGAAGAGAAAGTTTCAGAAAGGCAAAGGAGTTTTCAGTTTTAAGTTTGAAGCCCAGCAATGGGAACGTGAGGCAGATGAAGTCATTCATATAGACACTAAAATAAAGAAGAAATTGTTTTTTGGTTGGTGTCCGAATTGCTGGTCACAATATCGAAGAGGCAAGGAGTTAGCAGAGAAAACTCAACATATTGAAAAACTATTGGAAAGATGTAATTCCAATATAGTAGCTGGTCGAGCAAATGGGTTGGACATAAAATACCTTTCTTCACAAGGTTTCATTCATTTTGAGAGTAGAGAGTCAAAGTTCCAAGATCTATTGAAGGCATTACAGGATGAGAATTGCAATATGATTGGATTGCAAGGGTTAGGGGGAACAGGCAAAACTTCAATGGCAAAAGAAGTGGGTCATAAACTAAAAGAATTCAAACTAATTGACAATTGCATCTTTCTTGTTGTCTCCCAACCTCCTGATTTCAAAAAGATCCGTGGTGAACTTGCAAAAAGCTTATATTTGAATTTAGATGGAATGAAAGAAGAAGAACTTTCATCAAGTACAATATTGTCCAGAATCACTAATATGGACCAAAAGTTGCTTATAATATTAGATGATGTATGGGTAAAGTTTGATTTGACAGAAAAGTTGGGGATTCCATTTGGCCACCAACATAAGGGATGTAATTTATTGATAACCACACGAAGTTCACATGTTTGTACAGAAATGGGATGCCAAACAATTCAACTACAAATGTTAACCAATGAAGAGGCATTGAATCTTTTTGAGGCACATGCTAGTTTAAATAATTCCTATCGTGGTTTTAAGGGTATGCCACCAAAAATTGTGAGGCATTGTGGAGGAGTACCAGTTGCAATTGTAGCACTAGCAAGAGCATTGAAGAATCAACCTATATCGGTTTGGAAGGATGCTTTGAAAACCTTGGAAGATCATGGTCATGATCAAAACTTGGAAGAGGCTTATAAATGCCTAAAGTTAAGCTATGATAACTTGAAAAGTCAAAAGGCCAAAGAGCTCCTTCTGATATCTTCTTTGTTCCCAGAGGATTTTGAAATTCCTATAAAGCTTTTGATCAAAACAGGTATAGGATTGGGCTCTTTTAATGAAAATGACAAATACCATTTAATTAGAAATGAAGTACATGGAGCTATAATGGAGCTCATACATTCTTCTTTATTGTTGAATGATGAGGAAGAATATGTAAAGATGCATGATTTGGTTCGTGAAGTTGCCTTATGGATAGGAGAAAATGAAATTCAATCTCTCCTGAATTTGGAAAAGCCTATAAAAGGAAACTTGAGATATATGTTTTGGAAGACTGATAAATTTCCTGATGAAATTGATGGAAATAAATTGGAGTATCTATCAATATTTTTAGATGATCCAAAGGGTTTCAATGTCAAAGATACATTCTTTAAAGAGATGACAAGCATCAAAGTTTTGATTTTAGCTAATGATGGAAGAGGTCCAACTCTATCATTGACGAAGTCACTTCAACCATTGAATAGTGTTCAAACACTCATCCTAGCATATTTGGAATTAGGTGACATCTCTGTCTTAGGAAACTTGTTAACTCTTACGACTCTTTGTTTTTACAATTGTTCAATTGTTGAATTGCCTAACAAATTTTTGAAACTAAAGAAGTTGAGATCATTAGAAGTAGAAACATGTAAAATTAAAAGGAATAATCCTTTCGAAGTAATTGAAATGTGTTCACCACTAGAAGAGTTGACTTTTGTTGGTAATGAGTGTGACGATGAAGAAAAAGATGCAATTTCTCATAATGGATCTCCTCTTATATTGCATAGATATTGTATATCTTCTGAGGAAGACCTTTCATATTATTCTGAAAAGAATGGTTTGTCTAGATGCTTTCGAGCAGATGACTTAAGCAATTTAGTCTCACTTGCAACATTTAAACAACTTGTTGAAAGAGCTGAAGTTCTTTCGTTGGAAGGGGAGTATGGCAAAAGAATGTGGAAGAATCTTGTCCCTGATATTTTTCCAATACATAAACAAGGCCTAGAACTTTCAGGAGTACCAAGTTTCATTGGAATTGTCAAAGAATATCACCAACTCATGAGTTCATCAATGCACAAGCAGTCGCCTCCACTTTCAAGACACAATTCAAGGAACCTAAATCAAAGTCTTGCCACACGTGCTTTCTTTGGGTTTCAAGCATGTTGTTCTCTCAATAAATTGAAGCCTGCCAGCAAAGAGACAAATATTACTATTTTTGAAGATAGATCACTTGATTACACAAACCCACTGAAATTTGATGCATCAATAGATAGAGGTGCTTCTTCCTTTCTAGCTCAAAGCCTTTTGTTGCAATCATTGAAGAATGTTAGGGAAATAACACTTTTTGGATGTCATAACTTAATATCACTATCAACTCTATCCATTGCGACCTCAACAATTGCTTTGGAAACTTTGACAATCTATGGATGTCACAAACTGAAGTGCATCACAACACATGTGGGAGGTGCTCATGTTGATAGGAATAACTGTTCCATTTTTCCAACATTAGAGAAGCTGATAATCGAGGATTGTGAGGAGTTGGAATTTTTATTTGTATCAGCAATATCTGTTGGTCTTCAAAAATTGAAGTCTTTGACAATAGAGGGAGTGCCTAAACTAAAATGTGTTTTTGGGAACTACCAAAAGGAGAACCACTCATCCAATCAGAATCAAAATGATGAGCTTCATTTTGATCTCCCTGCTTTGGAGACCCTCTACATCAATGCACTGAAGATCAACAACATTTTTGCCAAGAATTATAGCATGGTGAATTGGATAGCTACAGAGGAAGTGCATGCATCCACAATGGGAGCTCCTCTGTTTCATGTAAACGAAAAAAACCTTTTGAAGAATATTAGAGAAATAGAACTTGTGGAGTGTACAAACTTATTATCATTGACAACAATATCCATTGCCTCAATAATTTTTTTGGAAGTTTTGATAATTAGAGCATGTGGTCAATTGAAGTGCATTGTAGAAGATGAGGGAGATGATAGAACTCGAATTGACTACAATTCCATTTTTCCAAAGTTGAAATGGTTGAAAGTTTCAAACTGCAATGTATTGGAATATTTATTCCCAGCATATGCTTTTCGATCCCCTGTATATTTGGAATCTTTGATGATTAGTAAGGCTCCTATGTTGAAATATGTATTTGGAAGAAGCCAACATGATGACAGTTTAAATCTTGAGAATCAGAATATCCAAACTCTTGTCAATTTCCCTGCGTTGAAAGATCTTATTATTTGCTATGTACCAAAACTTGTAAGCATTTATCCTGAAAGCTACTATATGAGAGGGTTATATCCAACGTCTGTTATTTTGAAAGAGCTTCCAGAGTTTACAATAAGACCTTTCAATGAATTTTTGATTTGTTGGCATACGAAACAACAGGAAACAAAGGTAATTGAGATGTGCTGGAAAACTTTGGAATCTCTTCAAGTTTGTGACGTCAAGATAGAAGAAATTTTCCATTTGACATACATGGAAACAGATAAAAAAGGGGATGAACTTCAACCATTGACATCAAGCTTACGATACTTGAAGTTGCTAAATCTTAGTGAGTTGGTGAATATATGTGTGGGGCCTCAATGTATCATACGCTTTGATAGTCTTCGGTTTCTAACCATTGAAGCATGCAAAAATGTCAGAGTTATCTTCTCTGCATCTATCATTAGAAGCCTACCAGTGTTGGAGGATCTATGTATATCAGAATGTGAAGAATTAGTTCACATTGTTGAGGAAGATTATGAAACAAATGCTGATGATCATGTGCGTCATGAACCATGCTTTCCCAACTTAGGACGTGTCTCTATATCAGATTGTGACAAATTGAAGTACCTATTCTCCATTACAATTTCTGATATCCTTCCAAAACTATTCTCTTTAGAGATATGCAGTGCCCATGAACTTGAGCATGTCCTAATCAAACAAGATGAGATGAAAGAGATGTTCATGAAGAATGTGCTTCCACAACTATGTCGTTTGGAACTTAGAAATCTTCCAAACCTCATTAGTGTCTGCCATGGGATCAATTTTCAAAAAGAAGATTATGCTACGGAAGTGTATAATTGCCCCAACTTTGACACTTCAACTACTCAATATCAAGCAGACCCTGAAACTGGAAATTCTCAAGTTGAAGAAGAAGCAAAGGAGAGGCTTTCTTCAGAAATGGGAGTAGAAATAGCACAACAATCCTTCACCAAGGGGGCAATAAAGGAGATTGTTGAAGAAGATTTCATGTCAGAGATCGCAAAAATGACAATTTCGTCATCGGATTCAAAACTTACAGGACAACTCGTTGTTGAAGCAAGAGCTAAAGGTGTTTCATCCAATACCTTATGTCAAATCTCCCTAACTTCTGTAAAGGAGGTGCCAATGCATACTAGTCTCAGCCTCACTGATCTTCCTACAGGAGATAACACTCATGCATGTTGCAAAATTTTTGAAGAGGAAGAGGAAGAACAAGGTTGCTTGAACACATCTCGACGTCTTCGAAGTGGCATCAAGGCTAGCAGCACTTTATCAAAGGATAAGTTTGAAACCTCTGTTGATGATGATGATGTTCAAGTTCATGATAAGTTTCATCCACATTCAACCAATTTGTTTGAAGGTGTTGACCATAGGGACATCAAGGAAATAGGCCTGGTTCAAAATGAATATAAGTCAAATGTTGAGCCAAGTAGCATAACACAAAGAGAACAAGAGTCATCATATTCTAAAGGCCAAATTCAAACAAAAGATCAATTAATAGATTCACAATCAAGAAGTGCAATGCCAACCACACCTTTTGTTACTATTTCACAAGATGAATACTTTGAGGGTGGTATACAGATTGTTGAAGTAAGAGGTGAAGAAGGTGCTTTGATACTAGAGACCCCACATCCAAGCTCCTTAACTTCTAAAGAGAGTGACAAAGAACTGAATCCCAGTGCTGTAAACAGATCTGATTCACAAAAGGATGAGCTGGCGGGCAAAGTAGCAAGAAATGAGAGAATCATGATTGATCCACAACAATCCACAGTGGGCACACGGAACTTTACAAAGGATGTGTTGGTGGGCAAAGAAGTGCAAAAGGAAACAATCATGATGGAACCACAGTTGCTACAAGAAAGGACAGGACATGATATACATTTTCATAAGGAAGACAAAGAGGAAAGAGAAGATAACGTTCAACTTCCTAATATTTCTCAATCCCTTGCCATTGACTCCAGTGGAAGTGGTAATCTTGTACCCAATATTACACATCCAATTAATTCATTGGAAGGTGTTAACAACGAAGGCATCAATGAAGCAAGTGTGGTTCAAAATGAATCCAAAACAAATGTGACATGCTATGGTGACCAAGCAAATTCAAGTAGCATAACACAAATTGAACAAGAGACATCACATTCTAGAGGCCGAACGGTTGGAACTCGTGATTGCGTAGAGTCAGATTTTATTGAGGACACAAAGTTGTCGGTGCCACCATTTTATACACCTATAGAGATGATGCCTTCTTTTCTAGAGACTAATAATGAGGCTTCAATCGTTCCTGGGGTGCAAGAAATAATTCACATGATGAAATTGGAGGGTTTTGAGAGTTTAATATTTGCAAAGGCACTCGAGACTCGCCCACAACTTCAACTCTCTACAAAAGATCGAAGTGCTAGAGTGTTGTGCATGTCCTACAGAGTATTGCTTGACATCTTGAACATTCTAACCACTAAGACTCCCTTGACGATCACTAAGGCAGACAAGAGGTTGTTGGCTGAACATTTAAAGGATGCTTATCTTTTGGGTTTTGACAAGGATTGGATTGAGTCTATAAAGACTAAGGTTTTTGATAGTGGGATATATGAAGTTGATAGCATCCAGAAAGTTTTAAAGGGTTTAGACAATGATCTTAAGAGCAATAAGGCAATGCTTGAAGCTATTCGGGATGAGGAGGTAGAGGCTGCGCGAGTGGTTGAAGTAGCTCAACAAGAGCAGGCCAATGTTATGGCTCGTCATACTCATCTTTTGAACGAACGTCAATATATGATCTTACAGAGGCACCAATGCTGGGAGATAATTACTGCTACAAATAGGCACTTTGGATTTTAG 6270 0.3676 MESCLLDLAKNEVQSLVNLVKNEAQYLCCFKNYVENFEQKKNILAAKQKDVKRKFQKGKGVFSFKFEAQQWEREADEVIHIDTKIKKKLFFGWCPNCWSQYRRGKELAEKTQHIEKLLERCNSNIVAGRANGLDIKYLSSQGFIHFESRESKFQDLLKALQDENCNMIGLQGLGGTGKTSMAKEVGHKLKEFKLIDNCIFLVVSQPPDFKKIRGELAKSLYLNLDGMKEEELSSSTILSRITNMDQKLLIILDDVWVKFDLTEKLGIPFGHQHKGCNLLITTRSSHVCTEMGCQTIQLQMLTNEEALNLFEAHASLNNSYRGFKGMPPKIVRHCGGVPVAIVALARALKNQPISVWKDALKTLEDHGHDQNLEEAYKCLKLSYDNLKSQKAKELLLISSLFPEDFEIPIKLLIKTGIGLGSFNENDKYHLIRNEVHGAIMELIHSSLLLNDEEEYVKMHDLVREVALWIGENEIQSLLNLEKPIKGNLRYMFWKTDKFPDEIDGNKLEYLSIFLDDPKGFNVKDTFFKEMTSIKVLILANDGRGPTLSLTKSLQPLNSVQTLILAYLELGDISVLGNLLTLTTLCFYNCSIVELPNKFLKLKKLRSLEVETCKIKRNNPFEVIEMCSPLEELTFVGNECDDEEKDAISHNGSPLILHRYCISSEEDLSYYSEKNGLSRCFRADDLSNLVSLATFKQLVERAEVLSLEGEYGKRMWKNLVPDIFPIHKQGLELSGVPSFIGIVKEYHQLMSSSMHKQSPPLSRHNSRNLNQSLATRAFFGFQACCSLNKLKPASKETNITIFEDRSLDYTNPLKFDASIDRGASSFLAQSLLLQSLKNVREITLFGCHNLISLSTLSIATSTIALETLTIYGCHKLKCITTHVGGAHVDRNNCSIFPTLEKLIIEDCEELEFLFVSAISVGLQKLKSLTIEGVPKLKCVFGNYQKENHSSNQNQNDELHFDLPALETLYINALKINNIFAKNYSMVNWIATEEVHASTMGAPLFHVNEKNLLKNIREIELVECTNLLSLTTISIASIIFLEVLIIRACGQLKCIVEDEGDDRTRIDYNSIFPKLKWLKVSNCNVLEYLFPAYAFRSPVYLESLMISKAPMLKYVFGRSQHDDSLNLENQNIQTLVNFPALKDLIICYVPKLVSIYPESYYMRGLYPTSVILKELPEFTIRPFNEFLICWHTKQQETKVIEMCWKTLESLQVCDVKIEEIFHLTYMETDKKGDELQPLTSSLRYLKLLNLSELVNICVGPQCIIRFDSLRFLTIEACKNVRVIFSASIIRSLPVLEDLCISECEELVHIVEEDYETNADDHVRHEPCFPNLGRVSISDCDKLKYLFSITISDILPKLFSLEICSAHELEHVLIKQDEMKEMFMKNVLPQLCRLELRNLPNLISVCHGINFQKEDYATEVYNCPNFDTSTTQYQADPETGNSQVEEEAKERLSSEMGVEIAQQSFTKGAIKEIVEEDFMSEIAKMTISSSDSKLTGQLVVEARAKGVSSNTLCQISLTSVKEVPMHTSLSLTDLPTGDNTHACCKIFEEEEEEQGCLNTSRRLRSGIKASSTLSKDKFETSVDDDDVQVHDKFHPHSTNLFEGVDHRDIKEIGLVQNEYKSNVEPSSITQREQESSYSKGQIQTKDQLIDSQSRSAMPTTPFVTISQDEYFEGGIQIVEVRGEEGALILETPHPSSLTSKESDKELNPSAVNRSDSQKDELAGKVARNERIMIDPQQSTVGTRNFTKDVLVGKEVQKETIMMEPQLLQERTGHDIHFHKEDKEEREDNVQLPNISQSLAIDSSGSGNLVPNITHPINSLEGVNNEGINEASVVQNESKTNVTCYGDQANSSSITQIEQETSHSRGRTVGTRDCVESDFIEDTKLSVPPFYTPIEMMPSFLETNNEASIVPGVQEIIHMMKLEGFESLIFAKALETRPQLQLSTKDRSARVLCMSYRVLLDILNILTTKTPLTITKADKRLLAEHLKDAYLLGFDKDWIESIKTKVFDSGIYEVDSIQKVLKGLDNDLKSNKAMLEAIRDEEVEAARVVEVAQQEQANVMARHTHLLNERQYMILQRHQCWEIITATNRHFGF 2089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1898 2089 Gene3D Ribonuclease Inhibitor 760 956 IPR032675 -
Acco08g1898 2089 Pfam NB-ARC domain 152 385 IPR002182 GO:0043531
Acco08g1898 2089 Gene3D - 139 300 IPR027417 -
Acco08g1898 2089 MobiDBLite consensus disorder prediction 1688 1718 - -
Acco08g1898 2089 Gene3D Ribonuclease Inhibitor 454 721 IPR032675 -
Acco08g1898 2089 Coils Coil 2017 2037 - -
Acco08g1898 2089 MobiDBLite consensus disorder prediction 1618 1653 - -
Acco08g1898 2089 MobiDBLite consensus disorder prediction 1689 1713 - -
Acco08g1898 2089 Coils Coil 369 389 - -
Acco08g1898 2089 Gene3D Ribonuclease Inhibitor 1114 1378 IPR032675 -
Acco08g1898 2089 PRINTS Disease resistance protein signature 167 182 - -
Acco08g1898 2089 PRINTS Disease resistance protein signature 833 849 - -
Acco08g1898 2089 PRINTS Disease resistance protein signature 242 256 - -
Acco08g1898 2089 PRINTS Disease resistance protein signature 334 348 - -
Acco08g1898 2089 Gene3D - 301 387 IPR042197 -
Acco08g1898 2089 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1198 1343 - -
Acco08g1898 2089 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 389 IPR027417 -
Acco08g1898 2089 Coils Coil 34 54 - -
Acco08g1898 2089 SUPERFAMILY RNI-like 1203 1397 - -
Acco08g1898 2089 SUPERFAMILY L domain-like 457 1138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1898 Acco-ChrAcco08 32098126 32109975 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1898 168 536 WRKY Transcription Factor Family AT5G45050 23.601 9.65e-07 52.4