Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1875 ATGAGTTTCTCCGATTCTTCCACGGAGGCTAAACGCCGGCCAGTTCGTACCCTGGTCGGAAAACTGAGTTCCGTTTCCGAGAAAACTCGGGTCGATGCTCTTTGTCAGCTTCGTCTTATGGCGAAGCAAGACCCAGAAATTCGTCCTCTGATTGTTGATTCAGGTGCCATTCCTTACTTAGCTGAAACACTTTATACGTCTACGCCTGATTCTCAAGAGAACGCCGCCGCAACGCTTTTGAATATCTCGATTTCCTGTAAAGAAGTTCTCGTCTCCACGCGCGGCGTCCTCGACGCGATTTCACACGTTTTGTCGAATCATCGATCTACGTCTTCTCCCTCCGCCGTTCAATCGTCCGCCGCCACTTTACACAGTCTCCTCGTTGTTGATGAGTACCGGCCGATCATCGGATCGAAACGTGATATCGTGTACGCGCTTGTGGACATAATCAAGTGCCTCAATTCGCCATCTAGGTCGATTAAGGACGCTCTCAAGGCCTTGTTCGGGATCTCGCTTTATTCGCTTAATCGGAGCACGATGATCCATCTCGGTGCGGTTGCGCCGTTGTTTTCTCTGGTTGTGAAGGACGGAAGAATCGGGATCGTGGAGGATTCTACGGCGGTGATTGCGCAAATCGCCGGTTGCGATGAGAGCGAAGAGGCATTTCGGAAGGCATCAGGAATTGGAGTGTTGGTAGATCTATTGGATTCAGTTACGGGATCAAGCATGAGGACCAAGGAGAATGCTGTATCGGCGTTGTTGAATCTGGTGATGTGTGGAGGAGATGACGTGGCGGCGGATGTGAGAGAGCAAGCGGAGAGGGCAATGGACGGCCTCGCCGATGTGGCGGAGAACGGCAGCGCCAAGGGGAAGAACAAGGCGGTGGCGCTGCTGAAGGTGTTGTTGGATGGATATGGAAGCAGTGAGAATGGATTGAGCGATCAAACTTCATGA 954 0.5199 MSFSDSSTEAKRRPVRTLVGKLSSVSEKTRVDALCQLRLMAKQDPEIRPLIVDSGAIPYLAETLYTSTPDSQENAAATLLNISISCKEVLVSTRGVLDAISHVLSNHRSTSSPSAVQSSAATLHSLLVVDEYRPIIGSKRDIVYALVDIIKCLNSPSRSIKDALKALFGISLYSLNRSTMIHLGAVAPLFSLVVKDGRIGIVEDSTAVIAQIAGCDESEEAFRKASGIGVLVDLLDSVTGSSMRTKENAVSALLNLVMCGGDDVAADVREQAERAMDGLADVAENGSAKGKNKAVALLKVLLDGYGSSENGLSDQTS 317
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1875 317 SMART arm_5 173 214 IPR000225 GO:0005515
Acco08g1875 317 SMART arm_5 215 258 IPR000225 GO:0005515
Acco08g1875 317 SMART arm_5 44 84 IPR000225 GO:0005515
Acco08g1875 317 Gene3D - 2 311 IPR011989 -
Acco08g1875 317 PANTHER U BOX DOMAIN-CONTAINING 14 301 - -
Acco08g1875 317 Pfam Armadillo/beta-catenin-like repeat 44 83 IPR000225 GO:0005515
Acco08g1875 317 SUPERFAMILY ARM repeat 15 302 IPR016024 -
Acco08g1875 317 FunFam ARM repeat superfamily protein 9 306 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco08g1875 Acco-ChrAcco08 31439272 31440225 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1875 15 301 U-box Gene Family AT2G23140 35.069 1.16e-32 125