Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1851 ATGTTAGGCCTGCGAGACCTACTTCTGATAGCTCCTAATCCTTCTTCTCTTCACCACCACCACCACCACCACCACCAGCAACAGCAGCAACAACAACCACCTCAACAGGACCATTCGAACCTTCATCCTCTTCCTTCTTCTGCTTCTCTCAGCGTCGGTCTCGGAATTTTCCCTCTCCTCACTGCAACTCCTTGCGTTCCCAATGACCTCCCTCACGATTCCGCCGATCACAATCACCAGAATACGGCGAGCAATTCCAATTTTTGGAACCTCAAGATGTGTCCGGCGGAAGTTCCGAATTCCGCCAAGAAAGGAGTGATCGATGTAGAAGGTGAAGAGAATGGGATCTTTGGGGGTGATTTTAGGGTCTGTCAGGATTGTGGGAATCGCGCCAAGAAAGATTGTGGGTATAGACGATGCAGGACTTGTTGTAAGGGACGTGGCTACGATTGTAGCACTCATATCAAGAGCACGTGGGTCCCCGCCGCTCGCCGCCGTGAGCGCCAGGTGACCGTTCTTGCCGCCGCAGGAGGTGGTGGTGGTTCTGGGTCGCCTCCTGGTTCTAAGAGGCCTAGAGCATTTGGGTCGTCACAGAATGCTGCTACCACTTCTCACAGTTCTGCCTCCAACGCTACTACGTCTAGAAGCTTAGATACTAGCTCTTGTCACCAAGATGCTAGCTTCAAACAGTCTTTACCAGGTCATGTTCGTGCCCCTGCAGTATTCAGGTGCCATAGAGTGTCAGCTATTGGTAATGGCGAAGATGAGTTTGCGTACATGGCCACAGTCCATATCAGTGGCCATATTTTCAAGGGGTTTCTGTATGATCAAGGTGCCGATGGGAAAAGCACAATCCCATGTGTTTCGGAACTTCAACTGGGAAATTATAGCAGTGAAAAGAATAGAGAATGTTCTTCTCCAATTGGGGTTCTTCCAACTAGTAATGCCTACCCTGCTTCTGGCTGCTGA 969 0.5046 MLGLRDLLLIAPNPSSLHHHHHHHHQQQQQQQPPQQDHSNLHPLPSSASLSVGLGIFPLLTATPCVPNDLPHDSADHNHQNTASNSNFWNLKMCPAEVPNSAKKGVIDVEGEENGIFGGDFRVCQDCGNRAKKDCGYRRCRTCCKGRGYDCSTHIKSTWVPAARRRERQVTVLAAAGGGGGSGSPPGSKRPRAFGSSQNAATTSHSSASNATTSRSLDTSSCHQDASFKQSLPGHVRAPAVFRCHRVSAIGNGEDEFAYMATVHISGHIFKGFLYDQGADGKSTIPCVSELQLGNYSSEKNRECSSPIGVLPTSNAYPASGC 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1851 322 MobiDBLite consensus disorder prediction 175 218 - -
Acco08g1851 322 MobiDBLite consensus disorder prediction 191 218 - -
Acco08g1851 322 NCBIfam LRP1 C-terminal domain 232 278 IPR006511 -
Acco08g1851 322 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 23 304 IPR007818 GO:0003700|GO:0006355
Acco08g1851 322 MobiDBLite consensus disorder prediction 28 45 - -
Acco08g1851 322 NCBIfam putative zinc finger domain, LRP1 type 123 165 IPR006510 -
Acco08g1851 322 Pfam Domain of unknown function (DUF702) 123 280 - -
Acco08g1851 322 MobiDBLite consensus disorder prediction 14 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1851 Acco-ChrAcco08 30582421 30583754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1851 1 308 C2H2 Transcription Factor Family AT5G12330 40.673 1.08e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Acco08g1851 DUF702 3.1e-56 No_clan