LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco08g1818	ATGGCTATTGAGACTAAGTTTGTAGGGTGTTGCGGAAGGTTCCTTGAGAACTCAAAACACTACATTGCCATGATTGCATTGCAATTTGGATTTGCAGGCATGAATATTATCACTAAGGTTTCACTCAACAAAGGCATGAGCCACTATGTCCTCGTGGTTTACCGGCATGCCTTTGCAACTGCTTCTATCGCTCCGTTCGCTTTCGTCCTCGAAAGAAAAGGTCAACCAAAGATAACATTCAAAATATTCATGCAAATTTTCATCCTTGCTCTTCTTGGACCTGTGATTGATCAAAATTTCTACTACGCTGGGCTGAAATTCACATCCCCAACCTTCTCTTGTGCATTGAGCAACATACTTCCAGCCATGACTTTTGTGATGGCAGTTTTATGCCGGATGGAGAAGATCAACATGAAGAAGGTGAGGTGTCAAGCAAAGGTGGTGGGAACAATAGTCACAGTGGCTGGGGCCATTTTAATGACATTATACAAAGGCCCTATTGTGGAAATGGTGTGGACCAAACATGCCTACTACTCTCATGCCACAACCAATAACCAAACTGCACAACACACTTCAACTTCCTCTTCCTCCTCAGACAAAAAATGGTTCATTGGCTCCATTTTCCTTATCATTGCAAGCTTTGCCTGGGCTTCCCTTTTTGTTTTACAAGCAAAAGCATTGGAGACATACAAGAGTCACCAGCTGAGTCTGACATCACTAGTGTGCTTCGTAGGAACCCTTCAGGCAATTGTTGTTACTTTTGTAATGGAACACAATCTTTCTGTGTGGAAGATTGGCTTTGACATGAACTTGCTTGCTGCTGCCTATGCTGGGATTGTGACGTCAAGCTTAACATACTATGTACAAGGACTGGTGATAAAGAAGAAAGGTCCTGTCTTTGCCACTGCCTTTAGCCCTTTGATGATGATTATTGTGGCCATCATGGGCTCCTTCATCCTTGCTGAAAAAATTTATCTCGGAGGTGTGATTGGGAGCATCTTAATAGTTATTGGATTGTACTCTGTCTTATGGGGAAAGCATAAAGAAAGAGTGGAAAGCAAAGTGGCTGAAGCAGAAGATATAGTCTTTCCAATGAAGGCCTCTCAAGTTGATGCAAATATCAACAATATTAATAATAACAATAATTATGCATCTGATGGCAAACAATTAATTAATAATAGTGAAGCAAAATCAGAGAAAGCAGAAGAATCCTTCAACAACAATAATTCAGTTCTCATTAGCATGCCTCACAGTACCAACCAAGAGCCAAAAGCTTAA	1278	0.4108	MAIETKFVGCCGRFLENSKHYIAMIALQFGFAGMNIITKVSLNKGMSHYVLVVYRHAFATASIAPFAFVLERKGQPKITFKIFMQIFILALLGPVIDQNFYYAGLKFTSPTFSCALSNILPAMTFVMAVLCRMEKINMKKVRCQAKVVGTIVTVAGAILMTLYKGPIVEMVWTKHAYYSHATTNNQTAQHTSTSSSSSDKKWFIGSIFLIIASFAWASLFVLQAKALETYKSHQLSLTSLVCFVGTLQAIVVTFVMEHNLSVWKIGFDMNLLAAAYAGIVTSSLTYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEKIYLGGVIGSILIVIGLYSVLWGKHKERVESKVAEAEDIVFPMKASQVDANINNINNNNNYASDGKQLINNSEAKSEKAEESFNNNNSVLISMPHSTNQEPKA	425

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco08g1818	425	PANTHER	WAT1-RELATED PROTEIN	21	356	IPR030184	GO:0016020\|GO:0022857
	Acco08g1818	425	MobiDBLite	consensus disorder prediction	394	425	-	-
	Acco08g1818	425	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	260	348	-	-
	Acco08g1818	425	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	54	164	-	-
	Acco08g1818	425	MobiDBLite	consensus disorder prediction	403	425	-	-
	Acco08g1818	425	Pfam	EamA-like transporter family	204	343	IPR000620	GO:0016020
	Acco08g1818	425	Pfam	EamA-like transporter family	21	161	IPR000620	GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco08g1818	Acco-ChrAcco08	29746756	29749897	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco08g1818	8	423	Nodulin-like Gene Family	AT5G07050	62.884	0.0	511