Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1808 ATGAAGTGCTTTTACTATTTCAAAGATAAATACAAGAGCAGAGGACAAAGATCAGCACCCGTGCTGAAAGAGCAAGAGAAATCTCAGTTTTCAGAAGCTGATAGAATCACCAGATCTGCATGTTCTACAGCCTCCAGCCGTGGTATACCAGAATTGTATGAGGAGAGGGCTCATAATTTGCGGGTTTTCTCTATCACGGAGCTCAGGCGCGCAACAAATGATTTCAATAGGCTTTTTAAGATAGGGGAAGGTGGATTTGGGAGTGTATATAAAGGTTCTATTCAGCCACTTGATGGAAAAGGAGGTTCTATTTTAGTTGCCATCAAAAAGCTGAACAAGGATGGATTACAGGGGCATAAACAATGGTTGACTGAAGTTCAGTTTCTTGGTGTTGTGGAGCACCTGAATCTCGTCAAACTCATTGGATACTGTGCGGTGGATGACGAAAGAGGGATTCAAAGACTACTTGTATATGAATATATGCCAAATAAAAGCTTAGAACACCATCTTTTTCATAGGGCATATGATCCTCTTGCTTGGAGAACAAGACTTGAAATACTACTTGGAGCAGCTCAAGGCTTAGCTTATTTGCATGATGAATCAGAAGTTCAGGTGATATACCGAGATTTTAAATGTTCAAACGTGTTATTGGATGAAAACTTCAAGCCAAAACTTTCTGATTTTGGACTCGCTAGAGAGGGCCCAATTGCTGGCAATACTCATGTTTCAACTGCGGTGGTCGGTACATTCGGGTACGCTGCTCCAGATTATGTTGAGACGGGTCATCTTACTACAAAGAGTGATGTGTGGAGTTTTGGTGTGGTTGTGTATGAAGTTCTTACGGGCAGGCGTTCACTGGAGCGAAACCGACCGAAGATGGAGCAGAAACTCTTGGAGTGGGTGAAACACTACCCTGCTGACAGCAAAAAATTCAGCTTGATTATGGATCCACGACTTGAAGGGCTATATTCTCACAACGCAGCGCAAAAGGTTGCCAAGCTTGCTGACAGTTGCCTTAGCAAGAGCGCCAAAGAGAGGCCGAAAATGAGCCAGGTGGTAGAGAGATTGAAGGAGATAATCCAAGCTACAAATGAAGAACATGTTTCAGAGGCAAGCTTTGAAGTATCCCAAGGTGACCCGCCCAACCCAGTAGAAAAGCCAGACCAATCTGGACCTTCAGAATTGTATAAAAAGAGGATGGCTCATCTTGCAAAGCTTGGTGAACTTGTTGAGAGTGATAGTAGAAGGAGACTTATGATCCTGCAGAAAGCTAAAGTCTTTTGA 1284 0.4322 MKCFYYFKDKYKSRGQRSAPVLKEQEKSQFSEADRITRSACSTASSRGIPELYEERAHNLRVFSITELRRATNDFNRLFKIGEGGFGSVYKGSIQPLDGKGGSILVAIKKLNKDGLQGHKQWLTEVQFLGVVEHLNLVKLIGYCAVDDERGIQRLLVYEYMPNKSLEHHLFHRAYDPLAWRTRLEILLGAAQGLAYLHDESEVQVIYRDFKCSNVLLDENFKPKLSDFGLAREGPIAGNTHVSTAVVGTFGYAAPDYVETGHLTTKSDVWSFGVVVYEVLTGRRSLERNRPKMEQKLLEWVKHYPADSKKFSLIMDPRLEGLYSHNAAQKVAKLADSCLSKSAKERPKMSQVVERLKEIIQATNEEHVSEASFEVSQGDPPNPVEKPDQSGPSELYKKRMAHLAKLGELVESDSRRRLMILQKAKVF 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1808 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Acco08g1808 427 Gene3D Phosphorylase Kinase; domain 1 49 160 - -
Acco08g1808 427 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 161 370 - -
Acco08g1808 427 ProSiteProfiles Protein kinase domain profile. 75 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1808 427 SUPERFAMILY Protein kinase-like (PK-like) 57 356 IPR011009 -
Acco08g1808 427 CDD STKc_IRAK 81 359 - -
Acco08g1808 427 Gene3D Transferase(Phosphotransferase) domain 1 161 378 - -
Acco08g1808 427 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Acco08g1808 427 MobiDBLite consensus disorder prediction 367 395 - -
Acco08g1808 427 PANTHER OS01G0588500 PROTEIN-RELATED 36 359 - -
Acco08g1808 427 ProSitePatterns Protein kinases ATP-binding region signature. 81 110 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1808 Acco-ChrAcco08 29209459 29218047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1808 61 386 Glycoside Hydrolase AT3G07070 47.416 2.15e-94 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco08g1808 PK_Tyr_Ser-Thr 1.6e-45 CL0016