Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1787 ATGGAATCACCAAAATTCACTATTCCCATTCCTGGATTTCTGATGATCTTCTTCATAATCTTGATCAGTTTCATCAAAACAAGTGTTTCTCTAGCACCAAATTACGTTGGGGATGACTGCCATAACAAAATCCCACAGACTCTTGCTTCCTCATACAAAGCCAATCTTAACCAGCTCCTCTCACGGCTCTCCACTGACTCTGCCACAAGCAAAGGCTACAATCACGGCTCCGTCGGAAACACCACCAACTCCGCCATTTACGGCCTCTACGACTGCCGTGGTGATGACCCAGGATACCTCTGCCATTTTTGTGTCGTAACTGCCACCAGAGAGCTTCTCCAACGCTGTCCTAATCAACCTTCTGCTACAATATGGTACAGCTACTGCATACTCCGATACTCGAACGAGAACTTCTTTGGGAAATTGACAATGAGTCCGTTGTGGTCTATGGAAGGAGAAAATAAGGTGTCGGATCCGACGGAGTGGAAGAAAACGGAGAGTTACATGCGGAGTCTGATCCGACAAGCGACAACGGAGGAGACGAAGGAATTAAGTGCATGGGGAGAATTTGATATGGAAGGTGGAGGAAGAAGGTATGGGTTGGTACAGTGTAGTAGAGACCTTGACAGAAAGAGTTGCAAGCAATGTCTGGAGGCTATGATGAATAACGCCACTGAATGTTGTGAGCAGAAGCAAGGATGGCAACTTGGGACGCCAAGTTGTATGATCAAATACAACAATTACATGTTTTATCAGCCACCCACTTCTGATCATAGTCCTACGACATATACCAATGATGGAGCTGGCAAGTACAAATCATTGATCTTAAGCATTAGTTTATTAGTGGCAGTGGCAATATTAAGTTTTTTTATCTACTTATGGCGAAGGATGAAGAATAGAAAAGATGAATCCCCATTGGAAGGCGCACCTATATTTTATGACTTGTCTAGAAGAGAGAGATCATTGAACTCAGACCTTCCCACTATTCCTTTGCATGTTATTCAACAGAGCACTCGTCACTTTTCGGAAGATTCTAAATTGGGACAAGGTGGATTTGGTACTGTTTATAAGGGAACATTGCCAGATGGGAAGGAAATTGCTGTTAAAAGACTCTCACAAGCATCAAGTCAAGGTTCAAAGGAGTTCAAAAATGAAGTGATATTCATAGCGAAATTGCAACATAGAAACCTTGTCAAACTCTTGGGTTGCTGCATAGAGAAAAATGAGAAGTTACTTGTATATGAGTACATGCCAAATTCTAGCCTTGACTTCCACCTTTTCGATGATGAAAATAGAAAGAAACTACATTGGAATCATAGACTAAATATTATTAATGGGATTGCAAAAGGACTTTTGTATCTTCATGAAGACTCTCGCCTTAGAGTAGTACATAGAGATTTGAAGGCTAGCAATGTCCTTTTGGACAATGATATGAATCCAAAAATATCGGATTTTGGTTTGGCAAGGACTTTTGAAGGAGCTCGAAATGAAGGAAATACAAATCGCATAATGGGTACTTATGGTTATATGGCTCCAGAATATGCTATGGAAGGATCATTTTCAGTGAAATCAGATGTTTTTAGTTTTGGAGTTCTTCTACTAGAAATTATATGTGGAAAAAAGATTTGCAGTTTCTATCTCTCTGAACAAGGCCAAAGTCTTCTAATTTATACTTGGAATTTGTGGTGCAAAGGCAAATGTTTGGAATTGATGGACTCAATGCTAAAAGATTCATATATAGCAAATGGAGTTTTGAAGTGCATACACATTGGATTGCTTTGTGTTCAAGAAGATCCAGATGATAGACCAACCATGTCTACTATTGTAATCATGCTTGCAAGTGACATAATGACATTACCATCACCTAATCCTCCTGCATTTTCTAGAAGAAAGTCCCTGGAAGATCAGTCATCTACTTCTAAAACTTTAAATGACGCTTCTGTTAATGAGATAATAGTATCTCACATCACACCCAGATGA 1980 0.4 MESPKFTIPIPGFLMIFFIILISFIKTSVSLAPNYVGDDCHNKIPQTLASSYKANLNQLLSRLSTDSATSKGYNHGSVGNTTNSAIYGLYDCRGDDPGYLCHFCVVTATRELLQRCPNQPSATIWYSYCILRYSNENFFGKLTMSPLWSMEGENKVSDPTEWKKTESYMRSLIRQATTEETKELSAWGEFDMEGGGRRYGLVQCSRDLDRKSCKQCLEAMMNNATECCEQKQGWQLGTPSCMIKYNNYMFYQPPTSDHSPTTYTNDGAGKYKSLILSISLLVAVAILSFFIYLWRRMKNRKDESPLEGAPIFYDLSRRERSLNSDLPTIPLHVIQQSTRHFSEDSKLGQGGFGTVYKGTLPDGKEIAVKRLSQASSQGSKEFKNEVIFIAKLQHRNLVKLLGCCIEKNEKLLVYEYMPNSSLDFHLFDDENRKKLHWNHRLNIINGIAKGLLYLHEDSRLRVVHRDLKASNVLLDNDMNPKISDFGLARTFEGARNEGNTNRIMGTYGYMAPEYAMEGSFSVKSDVFSFGVLLLEIICGKKICSFYLSEQGQSLLIYTWNLWCKGKCLELMDSMLKDSYIANGVLKCIHIGLLCVQEDPDDRPTMSTIVIMLASDIMTLPSPNPPAFSRRKSLEDQSSTSKTLNDASVNEIIVSHITPR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1787 659 Gene3D Phosphorylase Kinase; domain 1 313 416 - -
Acco08g1787 659 ProSiteProfiles Gnk2-homologous domain profile. 144 250 IPR002902 -
Acco08g1787 659 FunFam Cysteine-rich receptor-like protein kinase 28 36 137 - -
Acco08g1787 659 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Acco08g1787 659 SMART serkin_6 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1787 659 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 50 653 - -
Acco08g1787 659 Gene3D - 35 138 IPR038408 -
Acco08g1787 659 Gene3D - 148 250 IPR038408 -
Acco08g1787 659 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 312 416 - -
Acco08g1787 659 CDD STKc_IRAK 347 612 - -
Acco08g1787 659 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Acco08g1787 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Acco08g1787 659 Gene3D Transferase(Phosphotransferase) domain 1 417 618 - -
Acco08g1787 659 Pfam Protein tyrosine and serine/threonine kinase 344 610 IPR001245 GO:0004672|GO:0006468
Acco08g1787 659 FunFam Liguleless narrow1 417 620 - -
Acco08g1787 659 ProSiteProfiles Protein kinase domain profile. 341 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1787 659 Pfam Salt stress response/antifungal 162 248 IPR002902 -
Acco08g1787 659 Pfam Salt stress response/antifungal 47 135 IPR002902 -
Acco08g1787 659 SUPERFAMILY Protein kinase-like (PK-like) 325 632 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1787 Acco-ChrAcco08 28395279 28404183 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1787 16 659 Receptor kinase-like Gene Family AT4G05200 40.385 5.77e-167 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g1787 PK_Tyr_Ser-Thr 1.2e-50 CL0016