Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1773 ATGGCAGCAGAAGGTCGTGAGGGTGGGAGGATAGTGGTGGTAGTGGGTGCATCAAAAGATGTATCTTCAAAACCGATAATGAAGGCCTTGGAAAAGGCATTTCCTAAGGCTGGACAAGAGGTTATACTCATTGCCGTTCTTGAACAGCTCATCAGTCCCATGGGAATCAAGATCAGGGTCCATGACGACTCTATTTTCGCAGCAAACCAAAAAATTGTTGACAGCCAATTAGCTAAAATAAGGGACGACTTTAACAAGAGTTCAGAAATCATGAAACTCTCTCAGTATTGTGGAACCAAAAACATGGATTTCCAAATTGATGTGGTTGCACACCCTTTCATAGAGGTTGCTTCTGAGGCTGCCACAAGTTTAGGGGCAACATGGTTGATCGTTGACAGATTTTTGACCAGAGATAAGAAGAAATCGCGGTTACCTTGTGGTATAATAAGAATACGAAGTGACAGAACTGTTCAAAAGTTGTGGGGAACAGACAACTCCAAATCCCATTCCGCTGTGAAAACAATTCCTGAAAACCCAGTCCCAGATGAAGAGATTTCACCCAAGAGGCATAGAACATCACCAAGTGAACAACACTTGACATCAATGAATGACGAAGAGCAAGGAGGAGAAGATCAACAAGAATTTACAAGTGATCATGAAGAGTCTCAGATGGAGACAGAATTTACAAACCCACTTTGTTCTGTGTGTAAGAACAAACGGCCAAAAGCTGGATTGTTCAAAGACTTGAGTTACACAGAACTCAAGAAAGGCACACAAGGATTCTCCCCAAAGAACTTTCTATCAGAGGGAGGATTTGGAGCTGTCTACAAAGCAGAGCTGAGTGGGATAATTGTAGCTGTTAAGAAACTTAAAAACACAAGTGTCCAAGGAGAGAAAGAATTCAAATCTGAAGTCAAATTACTTAGCAGAGCAAGGCATGAGAATGTGGTCATGCTTCTGGGCTCCTGCTCAGAGGGAAATCGCAGACTTCTTGTTTATGAATACGTCTGCAACGGTTCATTGGACCAACATTTATCACAACACTCCCGAATTCCTCTTACATGGGAAGAGAGGATCAAAGTTGCTATTGGAGTTTCAAAGGGCTTGCAATACTTGCATGAGAATAACATTGTACACAGAGATGTGAGACCAAACAATATCCTTCTCACACATGATCTTCAAACTCTGCTGGGAGACTTTGGGCTTGCAAGAAATCAGCATCAAGATTCAATCCAGTCAACAGAAGTTATTGGAACTTACGGGTATTTGGCACCTGAATATGCAGAATTCGGGAAAGTGTCAGCCAAGATAGATGTGTATTCTTTTGGGGTGGTTCTGCTAGAACTCATAACAGGAATGAGAACAACAGACAAAAGACTTAAAGGGAGAAGTCTTGCAAGACCACTACTAAAAGACAGGAAATATCATGCTCTAATTGATGAAAGGATCAGCAATTGTCATGACTTTTATCAACTATTCTGGACGGTTCGAATAGCAGAAAAATGTCTTACTAGGGATCCTCAGAAAAGACTAAATATGTTGGCAGTGGTTAATGCTTTAAGTCGCATAATGGAAGGAAACACTTGCATCATACCAAGAGACTATTCTTGGCCAGCAAGGTCATCAGATTCTGATGAATCAGAATCAGAAGGTGAGGAGGAAGAAAAAGCCTTTGGCGAGCTAGAAAGCGAAAGCACAGATTCTACATCATCAAGTATTAGCTGCTCGGATATTATGAGCCAGATTATTGTAGGACACCCACCATCGCCTCCAATTTTTCCAACTTACAGAAGCTAA 1797 0.4151 MAAEGREGGRIVVVVGASKDVSSKPIMKALEKAFPKAGQEVILIAVLEQLISPMGIKIRVHDDSIFAANQKIVDSQLAKIRDDFNKSSEIMKLSQYCGTKNMDFQIDVVAHPFIEVASEAATSLGATWLIVDRFLTRDKKKSRLPCGIIRIRSDRTVQKLWGTDNSKSHSAVKTIPENPVPDEEISPKRHRTSPSEQHLTSMNDEEQGGEDQQEFTSDHEESQMETEFTNPLCSVCKNKRPKAGLFKDLSYTELKKGTQGFSPKNFLSEGGFGAVYKAELSGIIVAVKKLKNTSVQGEKEFKSEVKLLSRARHENVVMLLGSCSEGNRRLLVYEYVCNGSLDQHLSQHSRIPLTWEERIKVAIGVSKGLQYLHENNIVHRDVRPNNILLTHDLQTLLGDFGLARNQHQDSIQSTEVIGTYGYLAPEYAEFGKVSAKIDVYSFGVVLLELITGMRTTDKRLKGRSLARPLLKDRKYHALIDERISNCHDFYQLFWTVRIAEKCLTRDPQKRLNMLAVVNALSRIMEGNTCIIPRDYSWPARSSDSDESESEGEEEEKAFGELESESTDSTSSSISCSDIMSQIIVGHPPSPPIFPTYRS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1773 598 MobiDBLite consensus disorder prediction 538 573 - -
Acco08g1773 598 SUPERFAMILY Protein kinase-like (PK-like) 249 543 IPR011009 -
Acco08g1773 598 PANTHER OS01G0253100 PROTEIN 197 524 - -
Acco08g1773 598 MobiDBLite consensus disorder prediction 162 228 - -
Acco08g1773 598 ProSitePatterns Tyrosine protein kinases specific active-site signature. 377 389 IPR008266 GO:0004672|GO:0006468
Acco08g1773 598 Gene3D Phosphorylase Kinase; domain 1 234 335 - -
Acco08g1773 598 MobiDBLite consensus disorder prediction 546 560 - -
Acco08g1773 598 SMART tyrkin_6 261 520 IPR020635 GO:0004713|GO:0006468
Acco08g1773 598 Pfam Protein tyrosine and serine/threonine kinase 265 520 IPR001245 GO:0004672|GO:0006468
Acco08g1773 598 Gene3D Transferase(Phosphotransferase) domain 1 336 531 - -
Acco08g1773 598 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 336 535 - -
Acco08g1773 598 FunFam Proline-rich receptor-like protein kinase PERK8 223 335 - -
Acco08g1773 598 ProSiteProfiles Protein kinase domain profile. 261 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1773 Acco-ChrAcco08 27866940 27869548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1773 249 525 Trihelix Transcription Factor Family AT5G38560 45.734 2.56e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Acco08g1773 PK_Tyr_Ser-Thr 5.3e-50 CL0016