Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1767 ATGGTTATTGTTGTTTCCTCTTCTCAGATACCCTTAAATATAATCAGGCAACAAATTGTTATTCTCATCATGGATATAGATCTTAGGTTACCTTCTGGTGAGCATGATAAAGAGGATGAAGAGCCAAATACAATTGATAACTTATTGGATGGTGATGAAAAATTTCATAACGAAGACATAGAAGGAAGAAATATAGTTGATGCTGGTGTATCTGCTCTAGATGGCGGAGATTTGAATTCCCTAACATTGGATATGGCAATATTTAAGGAAGATACAAATCTTGAACCACTTTCTGGCATGGAATTTGATTCTCATGGGGAAGCTTATTCTTTCTACCAAGAGTATGCTCGGTCCATGGGATTCAACACAGCAATTCAAAATAGTCGCCGTTCTAAAACATCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACTAAACGGGAGTATGACAACAAATCATTCAGTCGACCACGAGCAAGACAGAATAAGCAGGAGTTTGAAAATTCAACTGGCAGGAGATCTTGTTCAAAGATTGATTGTAAAGCAAGCATGCATGTCAAAAGAAGGTCAGATGGAAAATGGGTTATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCTCAAGCTGTCAGTGAACAAGCACGGAAAATGTATGCCGCAATGGCTAGACAGTTCGCTGAATACAAAACTGTAGTTTGTCTAAAAAATGAGAAAAGTTCATTTGACAAAGCTCGGAATTTAGGCCTGGAGACTGGCGATGTCAGACTTCTGCTTGACGTCTTCATACAGATGCAAAACATGAATTCTAACTTCTTTTATGCTGTAGACATTGGAGAGGATCTACGGGTGAAAAGTCTTTTATGGCTTGACGCTAAATGTAGGCATGACTATATCAACTTTTGTGATGTAGTTTCTTTTGACACCACCTATGTGAGGAACAAATATAAGACGCCTCTTGCACTTTTTGTTGGAGTAAATCAGCATTATCAATTTATGTTGCTTGGGTGTGCCTTGATATCAGACGAAACTGCCACAACTTATTCTTGGCTGATGCAGACATGGCTGAAAGCAGTTGGGGGTCAAGTTCCTAAAGTGATAATTACTGACCATGACAAGACACTCAAGTCAGTGATTTCAGATGTATTCCCACATGCTCATCATTGTATGTGCCTATGGCACATATTGGGGAAGGTAACTGAAAATTTGGGTCATGTCATTAAACAACATGAGAATTTTATGGCAAAATTTGAAAAATGCATCCATAGGTCGTGGTCAAGTGATGAGTTTGAGAAGAGGTGGTGGAAAATGGTTGATAGGTTTGAACTTCGAGAGGATGATTACATGCAGACATTGTATACAGATTGCAAGTTATGGGTGCCGACATTCATGAAGGATGTATTTTTAGGGGGTATGTGTACCATCCAGCGATCTGAAAGCATAAATTCCTTCTTCGATAAATATGTTCACAAGAAGACCACTGTACAAGATTTTGTCAAACAGTATGAAACAATATTGCACGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGAAACTTGGAATAAAGTGGCAGCGTTAAAAACTCCTTCACCTCTAGAGAAGAGTGTTGCAGGAATTTACACACATGCAGTATTTAAGAAGATTCAGGTTGAGGTTATTGGTGCAGTTGCTTGTCATCCTAAACCTGAAAAGCAGGATGATGCTAGCATTACTTATAAGGTTCATGATATGAAAAGGAATCAAGAATTCACAGTTGTGTTGAATGAACTAAAATCAGAGGTGTCTTGTATATGTCGGTTATTTGAATATAAAGGTTATCTTTGTCGACATGCATTGATTGTTCTACAATATTCTCGCCTTTCGGCAATTCCTTCTCAATACATTTTGAAAAGGTGGACGAGAGATGCAAAGTCAAGGCATTTACTTGGGGAACAATCAGATCATATGCTGGCTAGGGTACAACGGTACAATGATTTAACTCAGAGAGTACTTAAACTGAGTGAAGAGGGATCTTTATCTCAAGAGAGTTATAGTATTGCATTCCATGCACTTCATGAGGCATATTCAAGTTGTGTGAGTGTTAACAATTCCAGTAAAGATCCTGCAGAAGCAGTCACATCAGCTGGTCATGCTCAGCTTTCCCCTGAAGAAGATACCCGGAGTAAAAATATGGGAAAGGCAAACAGAAAGAAGAATCCAGCTAAAAAGAAAAAGTTGAACTCTGAGGCAGAAGTGGTGACTGTTGGGGCTCAAGACAACTTGCAACAAATGGAGAAGTTCAACTCTAGGGCTGTAACACTAGATGGTTATTATGCTACTCAACAGAGCGTACAAGGAATGTTAAACTTGATGGGGCCAACTCGTGATAATTACTATGGAAATCAACAGACTATTCAGGGCCTGGGACAATTAAGTTCAATACCACCAAGCCATGATGGTTATTATGGTGCTCATCAGAGCATGCCTGGTCTGGCACAACTGGATTTTTTCGGAGCATCAACAAGCTTTGCATATGGCATTCGGGATGATCCTAACGCAAGAGCAGCACAACTGCATGAAGATCCATCAAGACATGCATGA 2601 0.3925 MVIVVSSSQIPLNIIRQQIVILIMDIDLRLPSGEHDKEDEEPNTIDNLLDGDEKFHNEDIEGRNIVDAGVSALDGGDLNSLTLDMAIFKEDTNLEPLSGMEFDSHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDNKSFSRPRARQNKQEFENSTGRRSCSKIDCKASMHVKRRSDGKWVIHSFVKEHNHELLPAQAVSEQARKMYAAMARQFAEYKTVVCLKNEKSSFDKARNLGLETGDVRLLLDVFIQMQNMNSNFFYAVDIGEDLRVKSLLWLDAKCRHDYINFCDVVSFDTTYVRNKYKTPLALFVGVNQHYQFMLLGCALISDETATTYSWLMQTWLKAVGGQVPKVIITDHDKTLKSVISDVFPHAHHCMCLWHILGKVTENLGHVIKQHENFMAKFEKCIHRSWSSDEFEKRWWKMVDRFELREDDYMQTLYTDCKLWVPTFMKDVFLGGMCTIQRSESINSFFDKYVHKKTTVQDFVKQYETILHDRYEEEAKADSETWNKVAALKTPSPLEKSVAGIYTHAVFKKIQVEVIGAVACHPKPEKQDDASITYKVHDMKRNQEFTVVLNELKSEVSCICRLFEYKGYLCRHALIVLQYSRLSAIPSQYILKRWTRDAKSRHLLGEQSDHMLARVQRYNDLTQRVLKLSEEGSLSQESYSIAFHALHEAYSSCVSVNNSSKDPAEAVTSAGHAQLSPEEDTRSKNMGKANRKKNPAKKKKLNSEAEVVTVGAQDNLQQMEKFNSRAVTLDGYYATQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPPSHDGYYGAHQSMPGLAQLDFFGASTSFAYGIRDDPNARAAQLHEDPSRHA 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1767 866 MobiDBLite consensus disorder prediction 706 749 - -
Acco08g1767 866 Pfam SWIM zinc finger 592 624 IPR007527 GO:0008270
Acco08g1767 866 ProSiteProfiles Zinc finger SWIM-type profile. 590 626 IPR007527 GO:0008270
Acco08g1767 866 Pfam FAR1 DNA-binding domain 110 213 IPR004330 -
Acco08g1767 866 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 90 698 IPR031052 GO:0006355
Acco08g1767 866 MobiDBLite consensus disorder prediction 155 174 - -
Acco08g1767 866 SMART 26again6 601 628 IPR006564 GO:0008270
Acco08g1767 866 Pfam MULE transposase domain 310 402 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1767 Acco-ChrAcco08 27728361 27732171 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco08g1767 FAR1 6.8e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco01g2584 01 42920091 42925129 Acco08g1767 08 27728361 27732171 CCT
Acco08g1767 08 27728361 27732171 Acco08g1767 08 27728361 27732171 ECH