Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1747 ATGGAATCATCAAAACCCAACATCATTCCAGGATATTCGATGATCTTCTTCATAGTTATAAGCTTCATCAGAACAAGTACTTCTCAGACCCCCAACTACGTTGGAGATGACTGCCATAACAAAACCCCACAAACTCTTACTTCATCGTACAAAGACAACCTTAACCAGCTACTCACAAGGCTGTCCGCCGATGCTTCCATGAGCAAACATTTCAGCAATACCATCATCGGAAACACCACCAACGACATCGTGTATGGCCTATACGACTGCCGTGATGATGTTGCCGGATACTTCTGCCAGTTCTGTGTCACTACTGCTGCCAGAGAGGTTCTCCAACGTTGCCCCAATCAATCTTCTGCTGTAATATGGTACAGCTATTGCATCCTGCGATACTCTAACGAGAACTATTTTGGGAAGGCGGTGATGACCCCATTATGGTCCGGGGGAGGAGAGAAGACGGTGTCAGATCCGACCGAGGGAAAGAAGGCGGAAAGTTTCATTAGGAATCTGATCGAAGAAGCGACCGAGGAGGCAAAGAGGTTGAGCGCATGGGGAGAGTTTAGTTTAGGTGGTGGAAGAACAAGGTATGCGTTGGCACAGTGCAGTAAAGACCTTTCCAACGTGGGTTGCAGGCAGTGTTTGGAGGCTATGTTGAATGAAGCTATTCAATGCTGTGAGCAGAAGCAAGATTGGCAAGTTGGGTCGCCAACTTGTATAATCAAGTACACTAATTACATGTTTTACCAGTCACCGTATTCCCATAATCCTAAGACAGCCAATAAAGGAGTTAGCAAGTTAAAAGCCTTGATCATAAGCGCAAGTGTATTAATGATTGTGGCTGTACTATGTTTTTCTTTCTACCTCTTCAGGCGGAGCAAGAGAAAAAAAGATGAAACGCCGTCGGAGAGCACTCCTATGGTTTTTGACCTTTCTCAAAGAGATAGTTCACTTAACACAGACCTTCCCACAATCCCTTTGCTTGTGATACAGCAGAGCACTCAATACTTTTCAGAAGATTCAAAATTGGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGAACACTACCAGATGGGAAGGAAATTGCTGTGAAAAGACTCTCTCAAACTTCAGGTCAAGGTTCACAGGAGTTCATGAATGAAGTGATATTTATAGCAAAATTGCAGCATAGAAACCTTGTTAGACTCTTGAGCTTCTGCATGGAGGAAAATGAAAAGCTACTTGTATTAGAGTACATGCCAAATTCTAGCCTTGACTCACACCTTTTCAGTGATGAAAATAGAAAGAAACTAGATTGGACAAGAAGACAAAATATTATTAATGGAATTGCAAGAGGACTTTTGTATCTACATGAAGACTCCCGACTTAGAGTCATTCATAGAGATTTGAAACCTAGCAATGTCCTTTTGGATTATGAGATGAACCCTAAAATATCAGATTTTGGATTAGCAAGGACTTTTGAAGGAGCACAAAATCAACGTAGTACAAGACGAATAATGGGTACATATGGCTACATGGCTCCAGAATATGCTATGGAAGGATTATTTTCAGTGAAATCAGATGTTTTTAGTTTTGGAGTTATTCTACTAGAAATTATATGTGGAAAAAAGATTAGCGGTTTCTACTTCTCCGAACATGGGCAAAGTCTTCTATCTTATGCATGGAATTTTTGGTGTGAAGGAAAATGTTTGGAACTAATGGATCCCATCCTAGAAGATTCATATACAGAAAATGAAATTTTGAAGTGCATACATATTGCTTTGCTTTGTGTTCAAGAAGATGCAGCAGATAGGCCAACCATGTCCACTGTGGTCGTCATGCTTGCAAGTGACACAATGTCATTTCCCATGCCTAGTCGTCCTGCATTTTCAGTTGGAAGAAAGGTCACAGAAGATTTATCTACTTCAAAAGATTCTAAAGATGCTTCTGTTAATGAGGTAACATTATCATCCATCAAACCAAGGTGA 1965 0.4112 MESSKPNIIPGYSMIFFIVISFIRTSTSQTPNYVGDDCHNKTPQTLTSSYKDNLNQLLTRLSADASMSKHFSNTIIGNTTNDIVYGLYDCRDDVAGYFCQFCVTTAAREVLQRCPNQSSAVIWYSYCILRYSNENYFGKAVMTPLWSGGGEKTVSDPTEGKKAESFIRNLIEEATEEAKRLSAWGEFSLGGGRTRYALAQCSKDLSNVGCRQCLEAMLNEAIQCCEQKQDWQVGSPTCIIKYTNYMFYQSPYSHNPKTANKGVSKLKALIISASVLMIVAVLCFSFYLFRRSKRKKDETPSESTPMVFDLSQRDSSLNTDLPTIPLLVIQQSTQYFSEDSKLGEGGFGPVYKGTLPDGKEIAVKRLSQTSGQGSQEFMNEVIFIAKLQHRNLVRLLSFCMEENEKLLVLEYMPNSSLDSHLFSDENRKKLDWTRRQNIINGIARGLLYLHEDSRLRVIHRDLKPSNVLLDYEMNPKISDFGLARTFEGAQNQRSTRRIMGTYGYMAPEYAMEGLFSVKSDVFSFGVILLEIICGKKISGFYFSEHGQSLLSYAWNFWCEGKCLELMDPILEDSYTENEILKCIHIALLCVQEDAADRPTMSTVVVMLASDTMSFPMPSRPAFSVGRKVTEDLSTSKDSKDASVNEVTLSSIKPR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1747 654 FunFam Cysteine-rich receptor-like protein kinase 10 292 411 - -
Acco08g1747 654 Gene3D - 32 136 IPR038408 -
Acco08g1747 654 Gene3D - 150 247 IPR038408 -
Acco08g1747 654 Pfam Protein kinase domain 337 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1747 654 ProSiteProfiles Protein kinase domain profile. 336 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1747 654 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Acco08g1747 654 SMART serkin_6 336 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1747 654 Gene3D Phosphorylase Kinase; domain 1 303 411 - -
Acco08g1747 654 ProSiteProfiles Gnk2-homologous domain profile. 142 247 IPR002902 -
Acco08g1747 654 Pfam Salt stress response/antifungal 162 245 IPR002902 -
Acco08g1747 654 Pfam Salt stress response/antifungal 38 133 IPR002902 -
Acco08g1747 654 Pfam Domain of unknown function (DUF3403) 609 654 IPR021820 GO:0004674
Acco08g1747 654 MobiDBLite consensus disorder prediction 632 654 - -
Acco08g1747 654 CDD STKc_IRAK 342 607 - -
Acco08g1747 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Acco08g1747 654 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 652 - -
Acco08g1747 654 FunFam Cysteine-rich receptor-like protein kinase 28 34 135 - -
Acco08g1747 654 FunFam cysteine-rich receptor-like protein kinase 10 412 614 - -
Acco08g1747 654 SUPERFAMILY Protein kinase-like (PK-like) 320 627 IPR011009 -
Acco08g1747 654 Gene3D Transferase(Phosphotransferase) domain 1 412 614 - -
Acco08g1747 654 MobiDBLite consensus disorder prediction 639 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1747 Acco-ChrAcco08 27326292 27334830 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1747 15 640 Receptor kinase-like Gene Family AT4G05200 41.267 2.48e-169 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g1747 Pkinase 3.8e-49 CL0016