Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1741 ATGTCTATTCAGTCAAGGGGCTCCAGTAGGAACTCGACCCGAGAAGTAAATTTCGGGCCTCCGGGTGCAGATTTTGAAGCAATCAGCACGTCCCAAAGGGAAATCAGCGATGCGGATGCGAGGTTAGTATATATAAATGATCCTGTGAAGACGAATGAGAGGGTTCTACTCTCAGGAAATTCGATTCGTACAGCGAAATACTCCATCATCACCTTTTTGCCCAAGAATTTATTTGAACAATTCCATAGAGTTGCTTACATTTATTTTCTTATAATCGCCATACTTAATCAGCTCCCTCAGATTGCCGTTTTTGGTATTGGGGTTTCTTTTTTGCCGTTAACCTTTGTTCTGGTAGCTTCGGCTGTGAAGGATGCATATGAGGACTGGAGGCGGCATCAGTCCGACAAAGTTGAGAACAACAGGGTAGCATCGATTGTGGTTGATAATTGTTTCCAAAAGAAAAAATATAAGGACATTAGAGTTGGCGAAATCGTTAAAATCCATGCAAATGAAACCATTCCATGTGATATGGTATTGCTGTCAACCAGTGATCCTACGGGTGTTGCATTTGTTCAGACTACTAATTTAGATGGAGAGTCAAATTTGAAGACTCGGTATGCAAAATCTGAGACCCTATCACTGTTGCCTGAAAAGGAGACGATTAATGGGTTAATTAAGTGTGAGAAACCGAATAGGAACATTTATGGGTTTCAGGGTAGCATGGAAATTGATGGGAAGCAATCCTCACTTGGACCATCCAATATTGTTCTCCGAGGCTGTGAAATCAGGAATACCAATTGGGCGATTGGTGTTGCTGTATATTGTGGCCAAGAAACTAAAGCTATGCTCAATAGCTCTGGGGCTCCATCAAAGAGGAGTCGGCTGGAGACTCGTATGAACAAGGAGATAATCTTGATCTCTTGCTTTCTTGTCACTTTGTGTACAGTTATCTCTGTTTGTACTGCTGTTTGGCTAAAATGCTACAAAGATGAATTGAATCTCTTGCCCTATTATCGAAAACTGGATGTTTCAAGTGGAAAAGCTAAAAGCTACAAGTATTCTGGATGGGGATTGGAAATACTGATTGCATTCCTCATGTCAGTTATAGTGTTCCAAGTCATGATTCCCATATCATTGTACATTTCCATGGAGCTTGTCCGGATTGGGCAGGCCTACTTCATGACAAGAGATACTAAACTGTATGATGAGGCATCGGATTCCAGATTTCAGTGTAGAACCTTAAATATAAATGAAGACTTGGGACAAATTAAATATATTTTCTCAGACAAAACTGGCACACTTACGGAGAACAAGATGGAATTTCAATGTGCAAGCATCTGGGGGGTTGATTACAGCTCTCAAAATGCCAATCTGGGGAATGAGCCTGTCTCAGTTGATGGAAATATATTGAAGCCTAAGGTGAAGGTGAAAGTTGATTCAGAGCTTCTGCAATTAATAAGAGGTGGATTAAAAAACAAGGAGCAAAAACATATTTGTGAGTTCTTCCTTGTGTTGGCAGCCTGCAATACTATTGTGCCTCTTCTTGTTGACACATCTGATCCCGAAGTCAAATTGATTGATTACCAAGGGGAGTCACCGGATGAACAGGCATTGGCATATGGTGCGGCCGCCTATGGCTTTACACTCCTAGAACGAACTTCAGGCTATATTGTAATTGATATTCAAGGAGAAAGACAAAAGTTCAAAGTCTTGGGTTTGCATGAATTTGATAGTGACAGGAAGAGGATGTCTGTTATATTGGAGTTCCCTGACAATTCTGTGAAAGTTTTTGTCAAAGGTGCTGATACATCAATGTTTAGTGTGATGGATAAATCACTAAGTATGGACATAATACGTGCAACTGAAACCCATCTTCACAATTATTCTTCTCTCGGTTTGAGAACCCTTGTTATCGGGGTGCGGGAATTAAATCCTTCAGAATTTGAGCAATGGCACTTTGCCTTTGAGGAGGCAAGCAATGCTCTGATTGGTAGGGCTGCTTTGCTCCGCAAGGTTTCCAGCAGTGTGGAAAACAATCTCTGCATATTGGGTGCATCTGCTATTGAAGATAAGCTGCAGCAAGGGGTGCCTGAATCCATTGAATCTCTAAGGACAGCAGGTATCAAGGTATGGGTGTTGACTGGCGATAAACAAGAAACCGCCATATCAATTGCTTACTCCTCAAAGCTCCTAACAGGCGATATGACTCAAATTGTTATTAATAGCAACAATAGAGAGTCATGTAGAATGAATTTACATGATGCCCTTGAAAAGTCTAACATACTCATGGCCATGTCTGGGGGTGCTAACAATATTGGAGGAAGTATTGAACGTGTAACAACTCAAATAGCATTAATTATTGATGGTACTAGCCTTGTTTACATTCTTGAAAGTGAAAACAGTGAACTTGAAGAACAGTTCTTTCAACTAGCATGTAAATGTTCTGTAGTTCTGTGCTGTCGAGTGGCTCCACTGCAGAAGGCTGGGATTGTTTCCCTTGTGAAGAAGAGGACTTCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATCCAAATGGCTGATGTTGGAGTGGGCATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCTTCAGATTATGCAATGGGACAATTTAGGTTCATAGTTCCTCTCTTATTGGTTCATGGCCACTGGAATTATCAACGGTTGGGTTACATGGTGCTATACAACTTGTACAGGAATGCTATCATTGTTCTTGTCCTATTTTGGTATGACTTGTACACTGCCTTCACTTTGACAACTGCTATAACTGAATGGAGCAGTTTGTTATATTCTGTCGTATACACAGCATTCCCAACTATTATTGTTGGTATTCTTGACAAAGATCTTAGTAAAAGGACTCTCCTGAAGTATCCACAGCTTTATGGAGCTGGGCAGAGAAATGAGGCCTACAATGAACATTTATTTTGGTTGACAATGGCTGATACTTTGTGGCAAAGTATTGTAGTGTTCTTTGTTCCTCTTTTCGCTTATTGGGGAAGCACCATTGACATATCAAGCATTGGAGATCTTTGGACCCTTTCAGTGGTTATTTTGGTTAATTTACACTTGGCCATGGATGTCATAAGGTGGGCTTGGATTACTCATGCAGCCATTTGGGGTTCTGTTATTGCAACCTTCATTTCTGTCATGATCATTGATGCTATACCCACTTTTCCTGGTTACTGGGCCATCTTTCATGTTGCGGGAACACGTGTGTTCTGGTTATGTTTGCTCGGATCCATTGTAGGAGCTCTGCTTCCTCGTTTTGTTATAAAGTTTGTGCATCAGTATTATTGTCCTGACGATATTCAAGTTTCAAGGGAAGCTGAAAAAAAGTCTGTGAATATGACAAGAGTGGTTGGTGGTGGGCAGATAGAAATGCTTCCTATCAGATGA 3432 0.412 MSIQSRGSSRNSTREVNFGPPGADFEAISTSQREISDADARLVYINDPVKTNERVLLSGNSIRTAKYSIITFLPKNLFEQFHRVAYIYFLIIAILNQLPQIAVFGIGVSFLPLTFVLVASAVKDAYEDWRRHQSDKVENNRVASIVVDNCFQKKKYKDIRVGEIVKIHANETIPCDMVLLSTSDPTGVAFVQTTNLDGESNLKTRYAKSETLSLLPEKETINGLIKCEKPNRNIYGFQGSMEIDGKQSSLGPSNIVLRGCEIRNTNWAIGVAVYCGQETKAMLNSSGAPSKRSRLETRMNKEIILISCFLVTLCTVISVCTAVWLKCYKDELNLLPYYRKLDVSSGKAKSYKYSGWGLEILIAFLMSVIVFQVMIPISLYISMELVRIGQAYFMTRDTKLYDEASDSRFQCRTLNINEDLGQIKYIFSDKTGTLTENKMEFQCASIWGVDYSSQNANLGNEPVSVDGNILKPKVKVKVDSELLQLIRGGLKNKEQKHICEFFLVLAACNTIVPLLVDTSDPEVKLIDYQGESPDEQALAYGAAAYGFTLLERTSGYIVIDIQGERQKFKVLGLHEFDSDRKRMSVILEFPDNSVKVFVKGADTSMFSVMDKSLSMDIIRATETHLHNYSSLGLRTLVIGVRELNPSEFEQWHFAFEEASNALIGRAALLRKVSSSVENNLCILGASAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIAYSSKLLTGDMTQIVINSNNRESCRMNLHDALEKSNILMAMSGGANNIGGSIERVTTQIALIIDGTSLVYILESENSELEEQFFQLACKCSVVLCCRVAPLQKAGIVSLVKKRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDYAMGQFRFIVPLLLVHGHWNYQRLGYMVLYNLYRNAIIVLVLFWYDLYTAFTLTTAITEWSSLLYSVVYTAFPTIIVGILDKDLSKRTLLKYPQLYGAGQRNEAYNEHLFWLTMADTLWQSIVVFFVPLFAYWGSTIDISSIGDLWTLSVVILVNLHLAMDVIRWAWITHAAIWGSVIATFISVMIIDAIPTFPGYWAIFHVAGTRVFWLCLLGSIVGALLPRFVIKFVHQYYCPDDIQVSREAEKKSVNMTRVVGGGQIEMLPIR 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1741 1143 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1123 - -
Acco08g1741 1143 FunFam Phospholipid-transporting ATPase 682 885 - -
Acco08g1741 1143 FunFam Phospholipid-transporting ATPase 527 660 - -
Acco08g1741 1143 Pfam Cation transport ATPase (P-type) 531 606 - -
Acco08g1741 1143 SUPERFAMILY HAD-like 422 891 IPR036412 -
Acco08g1741 1143 FunFam Phospholipid-transporting ATPase 115 284 - -
Acco08g1741 1143 Gene3D - 112 284 - -
Acco08g1741 1143 Gene3D - 679 885 IPR023214 -
Acco08g1741 1143 NCBIfam HAD-IC family P-type ATPase 108 209 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco08g1741 1143 NCBIfam HAD-IC family P-type ATPase 815 931 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco08g1741 1143 PRINTS Sodium/potassium-transporting ATPase signature 922 942 - -
Acco08g1741 1143 PRINTS Sodium/potassium-transporting ATPase signature 420 441 - -
Acco08g1741 1143 Pfam Phospholipid-translocating ATPase N-terminal 43 105 IPR032631 -
Acco08g1741 1143 ProSitePatterns E1-E2 ATPases phosphorylation site. 429 435 IPR018303 -
Acco08g1741 1143 CDD P-type_ATPase_APLT_Dnf-like 59 1005 - -
Acco08g1741 1143 SUPERFAMILY Calcium ATPase, transduction domain A 140 281 IPR008250 -
Acco08g1741 1143 NCBIfam phospholipid-translocating P-type ATPase 59 1119 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Acco08g1741 1143 Gene3D - 529 657 IPR023299 GO:0000166
Acco08g1741 1143 SFLD p-type atpase 411 896 IPR044492 -
Acco08g1741 1143 SUPERFAMILY Calcium ATPase, transmembrane domain M 60 1112 IPR023298 -
Acco08g1741 1143 Pfam Phospholipid-translocating P-type ATPase C-terminal 873 1112 IPR032630 -
Acco08g1741 1143 Pfam E1-E2 ATPase 143 384 - -
Acco08g1741 1143 SFLD C1.7: P-type atpase like 411 896 - -
Acco08g1741 1143 FunFam Phospholipid-transporting ATPase IC 424 436 - -
Acco08g1741 1143 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 433 695 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1741 Acco-ChrAcco08 27081282 27087322 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1741 13 1123 Primary Pumps ATPases AT5G04930 68.610 0.0 1617