LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco08g1739	ATGAAGCTGGCGATGGCGATGGTGACACAAGTTCGCCATTTTCATCATTTCTTCTTCGCCTTGCTCTTCTTTCTTGCCACCCTCCGTACACATCAGCTAGAACATTCTCAGTCTCATGCCCTTCTGAAATTCCAGAAGCTTCTGGGTTACCCATCAGCTCTAAGCAGCTTGAGAACCACGAACGATTTCTGCAACATTCAGCCTACTAACTGTTTGACGATAGTCTGCTATGAGGACAACGTAACGCAGCTTCATGTTGTAGGTGACAATGGGGTTTCTCCTTTGCCTCAAGATTTCTCTTCAGACTCTCTATTTGCCACTTTGGGTACTCTTTCGAGCTTGAAAGTTCTCTCTCTGGTTTCTATGGGTCTCTGGGGTCCTATACCTGAAAGCATTTCTCAAATGTCATCTCTGGAGATTCTCAACATTAGCACAAATCATTTCAGTGGAGCCATCCCAACCCAGCTTTCTCTGTTGAAGAATCTGCAATCTTTGGTTCTTGATGATAACGATTTCACAGGTGAAATCCCCATGCGCGTAGGTTCGCTTCTAGGTTTAGCTGTGTTGAGTATAAGAAGAAATTTTCTTAGTGGGTCTGTTCCAACTTCTGTTATTGATCTTCAAACTCTGAGGATTCTGGATCTATCAAATAATCATTTACATGGTGAACTACCTGGCCTTGGTAATTTGAAAAATCTACAAGTTCTTAATCTGGAAAACAACACATTGGGGCCACATTTTCCTTCTCTACCCACCAAGTTAGTTTCTCTAGTGCTTAGAAATAACAGCTTCCGGTTTGGTATACCTTCTAATTTAAGCACTTACTACCAGCTTCAAAAGCTGGACCTTTCATTAAATGGATTTGTGGGCCCATTTCTACCATCTTTACTGTCTTTGCCTTCCATCAAATACCTTGATGTTTCAGCAAATAAATTTACTGGGATGCTATTCAGTAATTATTCCTGCAATTCTGATATCTTTTTTGTGAATCTATCTTCAAATCTCTTAAAAGGGGAACTTCCCAGTTGTTTGAAACCAGGTAGCAAAGTGGTTGCTTTGTATGGTAAAAATTGTTTTTCAAATGAGTATCAAGATCAGCACCTTCCCACCTTCTGTCAAACTGAGGCTCTGGCAGTGAATGTTATGCCCCATGAACATAATCAGAGAAAAAGAACAACTGGTAAAGCAGTTCTTGTGTCAAGTATGGGAGGAATTGTCGGAGGAGCCTTTGTTTTTGGAGTGGTTTTTTTGGTCGTTTTACGAGTAAACAAAAAAGGATCTGTGAAAGCACCTGAAGGGTCTACATTGGAGCAAGCTACTAGCAACAAGAATGATAAAGATGATGAAGTTAAAACACCAAGAACTGTACTTTCAGTAATGGAGAATATCATGGGTCGAGTCCCTAAGCCTAACAAGGAATCCGTTAAAACACTTGCAAGATCCATGGTGGCGCATGTTGTTAAAAGGGTCCATCATAGACACGTGAGACCTGCAAGGTCCATAGTAGAGCATGCCTCATCAGTGAACACGGCAAAACTGCTCACAGATGCAAGGTATATTTCGCAAACCATGAAGATGGGTGCCAGCCTTCCTGCTTATAGGACTTTTGCTTTGGATGAACTCAAGGAGGCTACAAACAATTTTGAGGCATCAAGTTTTATAAGTGAAAAAGCTGCACGTGGTCAGATCTACAAAGGGTTTCTCTCTGATGGAACTCAGATTGCTGTGAAAAGTTTGAAAATGAGAAAAAGGCTTGGCCCTCAGACCTATATGCATCATATTGAATTGATTTCTAAGCTGAGGCATCCGCACTTAGTCAGTGCTCTAGGACATTGCTTTGAATGCAACCATGATGATCCAAGTGTCAGCAGTATATATTTCATATTTGAGTTTGCACCATACAAAAGTCTAAGAAACCGCATATCTGGATCTTCTGGGGAAAAGCTTTCTTGGGCACAGAGAATAGCTGCTGCAATTGGAGTTGTCAAAGGCATTCAATTTTTGCATACTGGCATTGTGCCTGGACTGTATTCAAATTATCTGAAGATAACAGATATTCTGCTGGATAACAATCTCAATGTCAAAATATGCAGCTATAATCTTCATCTATTGGCTGAAAATAAGATAATGGCAGGAAATGGAACTTTTTCCTCCGCAGTCAAAGGAAATGTTCAAGCAAGGACAAAGGATGGTGATAAGAATGATGTCTACGATTTTGGTGTAATCTTACTTGAAATCATTCTAGGACGCACAATCCTGTTCCATAATGAAGTTGGAACACTAAAAGATCTTTTACAGGTAAGCCTCGCAACTGATGAAATAGCTAGAAGGAGCATTGTTGATCCAGTGGTCCACAAGCAATGTTCAGATGAATCAATGAAGAGAGTGATGGAGTTATGTGTGAGATGTGTCTCAGAAGATCCTACTGAGAGGCCTTCTGTGGAAGATGCTCTCTGGAATCTGCAGTTTGCAGCACAGGTTCAGAATTCATGGGGAGGAGACTCCATTGATACAACTAGAGAATCACCTGCTTCACCTGACCAATAA	2547	0.4095	MKLAMAMVTQVRHFHHFFFALLFFLATLRTHQLEHSQSHALLKFQKLLGYPSALSSLRTTNDFCNIQPTNCLTIVCYEDNVTQLHVVGDNGVSPLPQDFSSDSLFATLGTLSSLKVLSLVSMGLWGPIPESISQMSSLEILNISTNHFSGAIPTQLSLLKNLQSLVLDDNDFTGEIPMRVGSLLGLAVLSIRRNFLSGSVPTSVIDLQTLRILDLSNNHLHGELPGLGNLKNLQVLNLENNTLGPHFPSLPTKLVSLVLRNNSFRFGIPSNLSTYYQLQKLDLSLNGFVGPFLPSLLSLPSIKYLDVSANKFTGMLFSNYSCNSDIFFVNLSSNLLKGELPSCLKPGSKVVALYGKNCFSNEYQDQHLPTFCQTEALAVNVMPHEHNQRKRTTGKAVLVSSMGGIVGGAFVFGVVFLVVLRVNKKGSVKAPEGSTLEQATSNKNDKDDEVKTPRTVLSVMENIMGRVPKPNKESVKTLARSMVAHVVKRVHHRHVRPARSIVEHASSVNTAKLLTDARYISQTMKMGASLPAYRTFALDELKEATNNFEASSFISEKAARGQIYKGFLSDGTQIAVKSLKMRKRLGPQTYMHHIELISKLRHPHLVSALGHCFECNHDDPSVSSIYFIFEFAPYKSLRNRISGSSGEKLSWAQRIAAAIGVVKGIQFLHTGIVPGLYSNYLKITDILLDNNLNVKICSYNLHLLAENKIMAGNGTFSSAVKGNVQARTKDGDKNDVYDFGVILLEIILGRTILFHNEVGTLKDLLQVSLATDEIARRSIVDPVVHKQCSDESMKRVMELCVRCVSEDPTERPSVEDALWNLQFAAQVQNSWGGDSIDTTRESPASPDQ	848

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco08g1739	848	ProSiteProfiles	Protein kinase domain profile.	549	823	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco08g1739	848	Pfam	Leucine Rich repeats (2 copies)	209	243	IPR025875	-
	Acco08g1739	848	Gene3D	Phosphorylase Kinase; domain 1	523	618	-	-
	Acco08g1739	848	ProSiteProfiles	Leucine-rich repeat profile.	209	231	IPR001611	GO:0005515
	Acco08g1739	848	Pfam	Protein tyrosine and serine/threonine kinase	559	816	IPR001245	GO:0004672\|GO:0006468
	Acco08g1739	848	SUPERFAMILY	Protein kinase-like (PK-like)	528	823	IPR011009	-
	Acco08g1739	848	Gene3D	Ribonuclease Inhibitor	36	154	IPR032675	-
	Acco08g1739	848	MobiDBLite	consensus disorder prediction	429	450	-	-
	Acco08g1739	848	SUPERFAMILY	L domain-like	47	359	-	-
	Acco08g1739	848	FunFam	Leucine-rich repeat receptor protein kinase EMS1	152	250	-	-
	Acco08g1739	848	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	633	837	-	-
	Acco08g1739	848	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	60	831	-	-
	Acco08g1739	848	Gene3D	Ribonuclease Inhibitor	252	400	IPR032675	-
	Acco08g1739	848	Gene3D	Ribonuclease Inhibitor	155	251	IPR032675	-
	Acco08g1739	848	Gene3D	Transferase(Phosphotransferase) domain 1	633	837	-	-
	Acco08g1739	848	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	522	631	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco08g1739	Acco-ChrAcco08	27053678	27059828	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco08g1739	193	846	Miscellaneous Gene Families	AT3G03770	40.288	1.05e-129	406

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Acco08g1739		PK_Tyr_Ser-Thr	4.1e-18	CL0016