Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1730 ATGTGGTTTAGTGATTTAATTGATATGCGGCAGGTTCCCTATGATGACCAACATTTATATATTCGCCTTGGTTCTCCAGAAGCAGCTGAACGTGGTGAAACTAATAGAAATAAGAAAAAGGTGATTACTGTTGCAGTGACCACTGTATTGGCTGTTATGATGCTTCTCACTATGTTTTACTTTTACAGGCGCAGAAGAAATTCTATAGCAAACAAGGAAGAAGGCTTTGATGGAAATATGGAGCTAAAAACCTTGATAGCAGGAAACAATGAAGAAGGCTATGAAGGAAATATGGAGCAACGTATCTATGACCTTGCAGTAATAGCAAATGCTACTAATAACTTCTCATTAGAAAAAAAGCTTGGTGAAGGTGGTTTTGGTCCTGTATACAAGGGTATGCTTGAGGACGGACAAGAAATTGCAGTGAAACGGCTTTCGCAAAGTTCTTCCCAAGGGCTAAATGAATTTAAGAATGAAGTCAGATTGTGTGCCAAGCTTCAACATCGTAATCTAGTTAAGGTTCTTGGATGTTGCATTCAAGGAGAGGAGAAAATGCTCATTTATGAATACATGCCTAACAAGAGCCTAGATTCGTTTATTTTTGGTTTTGAAGGTAAAATTCTTGATTGGTCCAAGCGCTTTCACATTATTTGTGGAATTGCTCGAGGACTTATGTATCTTCATCAAGATTCTAGATTGAAAATCGTCCATAGAGACCTTAAAGCAAGTAATATATTATTGGATAGTGAATTAAATCCAAAAATCTCAGATTTTGGCTTGGCAAGAATATTTGGAGGAGATCAAAATGAAGATAATACAAAGCAAATTGTTGGTACATATGGATATATGGCTCCTGAATATGCAATTCATGGACTCTTCTCCGTCAAATCTGATGTGTTCAGCTTCGGAGTATTGTTGCTAGAAATAGTGAGTGGCATGAAAAACAGGGGGCCCTTCTTGCAATGCCAAAGCGTTAATCTTATCGGACATGCATGGAGAAAAGGAATAGTATATTTTGATCTGAACACCAAGTCAACCTACCCAGTGGTTTGTGGTGGTGTGTGTGTGATGGATTTTGATTGTGAAGCCAATTCATTGAGGAGTCCCAAGAATGTCGAGGGCTGGGAAGTCTCTCTGGGACTATCATTATAA 1152 0.3837 MWFSDLIDMRQVPYDDQHLYIRLGSPEAAERGETNRNKKKVITVAVTTVLAVMMLLTMFYFYRRRRNSIANKEEGFDGNMELKTLIAGNNEEGYEGNMEQRIYDLAVIANATNNFSLEKKLGEGGFGPVYKGMLEDGQEIAVKRLSQSSSQGLNEFKNEVRLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDSFIFGFEGKILDWSKRFHIICGIARGLMYLHQDSRLKIVHRDLKASNILLDSELNPKISDFGLARIFGGDQNEDNTKQIVGTYGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGMKNRGPFLQCQSVNLIGHAWRKGIVYFDLNTKSTYPVVCGGVCVMDFDCEANSLRSPKNVEGWEVSLGLSL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1730 383 ProSiteProfiles Protein kinase domain profile. 115 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1730 383 Gene3D Phosphorylase Kinase; domain 1 83 190 - -
Acco08g1730 383 SUPERFAMILY Protein kinase-like (PK-like) 98 317 IPR011009 -
Acco08g1730 383 SMART serkin_6 115 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1730 383 Gene3D Transferase(Phosphotransferase) domain 1 191 349 - -
Acco08g1730 383 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 80 190 - -
Acco08g1730 383 CDD TM_EGFR-like 42 72 - -
Acco08g1730 383 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 17 335 - -
Acco08g1730 383 FunFam Lectin-domain containing receptor kinase A4.3 191 338 - -
Acco08g1730 383 Pfam Protein tyrosine and serine/threonine kinase 116 314 IPR001245 GO:0004672|GO:0006468
Acco08g1730 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1730 Acco-ChrAcco08 26822623 26826403 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1730 41 333 Receptor kinase-like Gene Family AT4G23230 54.422 4.32e-105 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g1730 PK_Tyr_Ser-Thr 2.6e-49 CL0016