Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1711 ATGCATGTGGAGAACCCTTATCTGCTTCCTGTTGATTATTCCTCTGATTGCAAAGCACTTCGAAAAGTAAAAAAAGAAGAAAAAAAAAATCTTTTGCCATGTTTCAGAGAATTTACTGCGTTTACAAGGAAAAAAGTGATGGAGGATAATACCGAAGGAAAAGCTGAATTACAGAATGCACCATCTTCAGTTGTTGCTGTATGTATCAAGGGTAGCAAGAAAAGCAAAAGTGCATTACAGTGGGCGCTTAAGAGGTTTGTGCCTGAAGGGAGGATCATGTTTAAGCTGATACATGTCCATGCCAGTATAAAAGGAGTACCAACACCAATGGGAAATTTTATCCCTATTTCACAAGTGCGTCCTGATGTAGCAGATGCCTTCAGAAAGGAAGTTGAGTGGCAGAAAAGTCAAATGCTTCTACCCTTTAAAAATATGTGTGATCAGAAGAAGGTATATGTAGATACAGTGGTGATCGAATCTGATGATGTTGCAACTTCTATAGCAGAAGAAATTGCTAAGGGCTCTGTGACCAAACTCGTTATTGGAGCTTCATCTCGTAGCATATTTTCTAGCAAGCTTAAGGGCGTTGCTGCAAAAATATCAGTTTGTACTCCAAGATTTTGTACAGTTTATGCTATTTCCAAAGGAAAATTGTCTTCTGTACGGCCGTCAGATGCACAGATTGATGAGAGCTTTGTAGATAACAGTAGTGAAACCAATGGTTCCAGCAGTTCATCAAACTACACTTCCACCTCTCAGTCAGACTCTGTCACAGTTGCTTCATATGGTCCTTCAAATTCCTCTTTAAAAGAACAGCGATTTCAAGCTCTTTCCTCTATTAATCAGACCGTCCTAAGTGCAAATCCTAGTTTTATTGAATCTAACCATTCTAGATCTCAGTCCCTTGATATTGGAACAGAGATTAATGGTACAAGATTGTCTGCTAGAAATTCTAGTATTGGCTATGGTCTCAGTCGGGCTTCTAGTTGCCAAAGCTTTAAATCAGAAACAGAATCATGTATTCGTGTTCAAAATTCCACCATTGACGTGGCACCAGCAACTGAATCTCCTCCTGTTAGGCTGGAAAATATTACCCTTGAGCTACAAAAGTTGAGGATAGAATTAAGACATGCCCAAGGATTGCATGCAATAGCTCAAAGTGAGAACATTGATGCATCACGGAAGCTTAATGATCTAAACAAGAGACGATTGGACGAATTAATGAAACTCAATGAGATTATTGCAAAGGAAGAGTTGGCAAAAGAATCATTAGGGAAAGAGAGAGAGAAATATGAAGCTGCAAAAAGAGAAGCTGACTATATGAAAGAATGTGCTGAAAGGGAAGCTGCAGAAAGAACAGACACAGAGATGAAAGCTGTTCGTGCTGCACAAGAGAAAGAAAAGCTAGAGTCTGCTCTTACTGGTTCAACAACTCATTACCATAAGTTTACATGGGACGAGATAGTGTCTGCTACCTTATCTTTCTCTGAAGATCTGAGAATCGGAATGGGAGCTTATGGTACAGTGTACAAGTGTAATTTGCATCATACTGTTGTAGCTGTTAAAGTACTCCACTCTAAAGGAAGCCACAAAAGCAAGCAATTCCAACAGGAGCTAGAAATCTTGTCCAGAATTCGTCATCCTAATTTGCTGCTTCTTCTTGGTGCATGTCCTGATGATGGATGTCTTGTATATGAATATATGGAGAATGGTAGCTTGGAGGACCGGTTATTCAGGAAAAACGGTACGGGCCCAATTCCTTGGTATGATAGGTACCGGATTGCATGGGAAGTAGCATCAGCCCTTGCCTTTCTTCACAGCTCAAAGCCGACACCCATCATCCACCGCGATTTAAAACCAGCAAACATTTTGCTTGACGGTAACTTAGTGAGCAAGATTGGTGATATTGGTCTTTCTACAGTGCTCAGTTCAGATGTCTCCTCTACCATGTACAAGGACACAGCACCTGTTGGGACTCTTTGCTACATAGATCCGGAGTATCAAAGGACCGGGTTGGTGTCTCCAAAATCTGATGTGTATGCTTTTGGAATGGTGATCTTACAATTGTTGACAGCAAAACCAGCTATAGCACTCACTCATGTGGTAGAAACAGCAGTTGATGATGGAAAACTCGCAGACATATTGGACCCAGAGGCAGGGAGTTGGCCACTTCAGGAGACAATGGACTTAGCCCGGTTAGGACTTAACTGTTCAGAACTCCGCCGTAGAGACCGACCAGATTTAGATAATGTGATTCTTGAACTGGAACGATTGAAGGAAGTTGCTGACAGAGCCCAAAGTTCCAGTCTTGGTGTTAAATCAAAACCTCCTAATCATTTTGTTTGCCCAATACTCCAGGATGTGATGGATGATCCTTGTGTTGCTGCGGATGGATATACATATGATCGCAAAGCAATCGAAACATGGCTTGAAGAGAACGACAAATCACCGATGACTAATATGGAACTTCCTCATAAGAACATAATCCCTAATTACACACTTCTATCAGCAATTATGGAGTGGAAATCTGGAGGAAAGTGA 2541 0.4109 MHVENPYLLPVDYSSDCKALRKVKKEEKKNLLPCFREFTAFTRKKVMEDNTEGKAELQNAPSSVVAVCIKGSKKSKSALQWALKRFVPEGRIMFKLIHVHASIKGVPTPMGNFIPISQVRPDVADAFRKEVEWQKSQMLLPFKNMCDQKKVYVDTVVIESDDVATSIAEEIAKGSVTKLVIGASSRSIFSSKLKGVAAKISVCTPRFCTVYAISKGKLSSVRPSDAQIDESFVDNSSETNGSSSSSNYTSTSQSDSVTVASYGPSNSSLKEQRFQALSSINQTVLSANPSFIESNHSRSQSLDIGTEINGTRLSARNSSIGYGLSRASSCQSFKSETESCIRVQNSTIDVAPATESPPVRLENITLELQKLRIELRHAQGLHAIAQSENIDASRKLNDLNKRRLDELMKLNEIIAKEELAKESLGKEREKYEAAKREADYMKECAEREAAERTDTEMKAVRAAQEKEKLESALTGSTTHYHKFTWDEIVSATLSFSEDLRIGMGAYGTVYKCNLHHTVVAVKVLHSKGSHKSKQFQQELEILSRIRHPNLLLLLGACPDDGCLVYEYMENGSLEDRLFRKNGTGPIPWYDRYRIAWEVASALAFLHSSKPTPIIHRDLKPANILLDGNLVSKIGDIGLSTVLSSDVSSTMYKDTAPVGTLCYIDPEYQRTGLVSPKSDVYAFGMVILQLLTAKPAIALTHVVETAVDDGKLADILDPEAGSWPLQETMDLARLGLNCSELRRRDRPDLDNVILELERLKEVADRAQSSSLGVKSKPPNHFVCPILQDVMDDPCVAADGYTYDRKAIETWLEENDKSPMTNMELPHKNIIPNYTLLSAIMEWKSGGK 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1711 846 Coils Coil 361 402 - -
Acco08g1711 846 Gene3D Transferase(Phosphotransferase) domain 1 568 774 - -
Acco08g1711 846 Gene3D HUPs 63 204 IPR014729 -
Acco08g1711 846 Pfam Protein kinase domain 498 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1711 846 ProSitePatterns Protein kinases ATP-binding region signature. 501 522 IPR017441 GO:0005524
Acco08g1711 846 Coils Coil 414 448 - -
Acco08g1711 846 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 65 200 - -
Acco08g1711 846 ProSiteProfiles U-box domain profile. 775 846 IPR003613 GO:0004842|GO:0016567
Acco08g1711 846 MobiDBLite consensus disorder prediction 231 264 - -
Acco08g1711 846 SUPERFAMILY RING/U-box 771 842 - -
Acco08g1711 846 ProSiteProfiles Protein kinase domain profile. 495 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1711 846 SMART Ubox_2 779 841 IPR003613 GO:0004842|GO:0016567
Acco08g1711 846 SUPERFAMILY Protein kinase-like (PK-like) 476 755 IPR011009 -
Acco08g1711 846 Coils Coil 748 768 - -
Acco08g1711 846 CDD STK_N 64 216 - -
Acco08g1711 846 Gene3D Phosphorylase Kinase; domain 1 463 567 - -
Acco08g1711 846 SMART serkin_6 495 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1711 846 PANTHER OS02G0152300 PROTEIN 64 840 - -
Acco08g1711 846 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 775 845 IPR013083 -
Acco08g1711 846 CDD RING-Ubox_WDSUB1-like 777 831 - -
Acco08g1711 846 Pfam U-box domain 777 842 IPR003613 GO:0004842|GO:0016567
Acco08g1711 846 CDD STKc_IRAK 501 758 - -
Acco08g1711 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1711 Acco-ChrAcco08 26253157 26259898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1711 62 843 U-box Gene Family AT4G25160 51.593 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Acco08g1711 Pkinase 5.2e-40 CL0016