Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1700 ATGGAGGGCAAGTTAGGATTAGTTGCAGGCTCTCGCAACTGCAACGAGTTCATCATCTTCAACCCAGATGCCAATTTTTCTAGAAGAGAAGAGGAAGAAGAAAGAGGGAAAGAATGCAAAATATGTGGGGATGAGATAGGAATAAACGAAGACGGAGAGGTGTTTGTGGCGTGCAATGAGTGCGCTTTCCCTGTTTGTAGGAACTGTTATGAGTATGAGAGACGAGAAGGCAGCCATGTCTGTCCTCAGTGCAAAACCAGATATAAACGTATCAAGGGGAGCGCTAGAGTTGATGGAGATGAGGAGGAAGATGACATTGATGACTTGGAGAATGAGTTTGACTTCGATGGAGAAACAAGAGAACAGGACATGAAGCCTCACGTTTATTCCCAGGATGAAGATGATGAAAAGGTGGGAGAAGGGCATAACAATAATAACGCAATAGAGCCATCGAGCATGGGCAATAAGGTAATTTCAATACAAGCAAGACCTATGGATCCTTCGAAAGACTTGGCTGCCTATGGCTATGGAAGTGTTGCTTGGAAGGAGAGAATGGACATTTGGAGGCAACGACAAGAAAAAATGCGGCTCATGAGAATTGACAATAATAGCACTAATGAAGATTTCCAAGATAGTTTTGCAGATGATGATGGCATAGATTTTTCTCTAATGGACGAGGCAAGACAAGCATTGTCGAGAAAGATGGCAATTTCGTCAAGCAAAATAAATCCTTACAGAATAATGATAATAATTCGAATGGTGATTCTTGGATTCTTCTTCCATTATAGAGTGACGCATCCTGTGGACAATGCTTTTGCTCTCTGGCTCGTTGCTGTTGTCTGTGAGCTTTGGTTTGCTCTTTCATGGATTTTTGATCAGTTCCCAAAGTGGTTCCCTGTTCGGAGAGAAACCTATCTAGATAGGCTCTCCTTAAGGTATGAGAAAGACGGGGGGGCTTCACAACTTTGTGGAATTGATATATTTGTGACAACATTGGACCCATTGAAGGAACCTCCATTGGTGACTGCAAACACAATTCTTTCTATTCTTGCGGTGAATTACCCACCTGAGAAGGTCTCATGCTATGTCTCCGATGACGGCGCCGCCATGTTAACATTTGAAACCTTATCTGAAACTTCTGAATTTGCAAGGAAATGGGTCCCCTTTTGTAAGAAATTTAACATTGAGCCTCGCGCTCCTGAGTGGTATTTTGCTGAGAAGGTAAATTACTTGAAAGATAAGGCACACCCTTCGTTTGTTAGAGAGAGAAGAGCTATGAAGAGAGAGTACGAAGAGTTTAGAGTTCGAATTAATTCTTTGGTTGCAAAGGCTAGAAAGGTGCCCGAAGAAGGATGGACAATGCAGGATGGAACAATATGGCCTGGAAATAATGTCGATGACCACCCTGGGATGATTCAGGTTTTTCTTGGACAATATGGAGGACATGACACGGATGGAAATGAATTGCCACGCTTGGTATATGTTTCTAGGGAAAAGAGACCTAAATTCAAACACCATAAGAAAGCAGGAGCGTTGAATGCATTGGTTAGAGTTTCAGCTGTGCTTTCAAATGCTCCATATTTGTTAAACTTGGACTATGAACACTACATCAACAATAGCAAAGCTATCAGAGAAGCAATGTGCTTCATGATGGACCCATTACAAGGAAAAAGTGTATGCTATGTTCAGTTCTCTCACAGATTTGATGGAGCTGATAGTAATGACAAGTATAACAGTCCAAGTACAGCATTCCTTGATATTAACATGAAAGGCTTGGATGGGATTCAAGGACCTATATATGTTGGGACAGGATGTGTATTTAAAAGGCATACACTATATGGTTATGATGCTCCTAGAAAAAAGAAGACACCAACTAAGACTTGCAATTGTTGGCCAAAGTGGTGTTGTTGTTTGTGTTGTTGCTTGAGAAACAAGAAGAAAAAGTCAAAGAATTCGAGGTTTGACTTTGAAGATAGTAGCAACTCAAAAGTGCATGATGCAGAGATATCAATGAAAGACTATGCTTTGACCTGTATTGAGCAGGGAACCAATGGAGTTGGAGGGAATATTTTGGGTGAAACATATAAGCCAAAGTTGTGGAAGAAATTTGGACAATCTCCTGTACTTATTGCATCTACTATTCTAGAAAATGGTGAGACAGTAAAAGATGCCAGCCTTGCTTCTCTACTTAAAGAAGCCATCCATGTCATTAGCTGTAGCTATGAGGTGAAGACTGATTGGGGAAAAGAGGTTGGATGGATCTATGGTTCAAATACAGAGGATATACTAACAGGGTTTAAAATGCATTGCCATGGATGGAGATCAATATATTGTAGCCCAGAAAGGCCTGCATTCAAAGTTTCTACACCAAGGAACCTTTCAGATGGTCTGGTTCAAGTGTTTAAGTGGGCATTAGGATCCACAGAGATATTCTTGAGCAAACATTGCCCTATTTGGTATGGCTATAGAGGAGGATTGAAGTGGCTAGAACGTATTTCTTACATAAATGCTACTATTTATCCATGGACATCTATTCCTCTTGTTGCTTATTGCACTCTTCCTGCAGTTTGCCTACTCACAGGCAAATTTATTGTTCCTCAGCTCAATAACTTTGATGGCGTGTGGTTTCTCTCACTATTTATATGCATATTTTCCACAAGCATACTAGAGATGAGATGGAGTGGAGTGCCAATTGATGAGTGGTGGAGAAATGAGCAACTCTGGCTGATAGAAGGAGTATCAGCAAATTTATTTGCACTATTTTTAGGACTGTTCAAGGTGATGACTGGTATAGACACAAAGTTCATTGCGAAATCAAAAGCAAGTGATGAAGAAGACAAGGACTTCGCAGGCCTATTTTCTCTGAACTGGACTACTTTGCTCATTATACCAACCACTTTGTTAATTTTGAACCTCATTGCCATAGTTGCTGGTGTGTCACATGCAATTAATGATGGTTTTGAATCTTGGGGTCCTTTATTGGGGAAACTATTATTTGCCTCTTGGGTGATTTGTCATTTATACCCTTTCCTTAAGGGTATGATGGGTAGGCAAAATAGGACTCCCACCATTGTTCTTGTTTGGTCTATTTTGCTTGCTTCTTTCTTTTCAGTTTTGTGGGTCAAGATTGACCCTTTCTTGCCCAAATCCAGTGGCCCAATTTTGGAGGAGTGTGGATTGTACTGTGATTAG 3192 0.4082 MEGKLGLVAGSRNCNEFIIFNPDANFSRREEEEERGKECKICGDEIGINEDGEVFVACNECAFPVCRNCYEYERREGSHVCPQCKTRYKRIKGSARVDGDEEEDDIDDLENEFDFDGETREQDMKPHVYSQDEDDEKVGEGHNNNNAIEPSSMGNKVISIQARPMDPSKDLAAYGYGSVAWKERMDIWRQRQEKMRLMRIDNNSTNEDFQDSFADDDGIDFSLMDEARQALSRKMAISSSKINPYRIMIIIRMVILGFFFHYRVTHPVDNAFALWLVAVVCELWFALSWIFDQFPKWFPVRRETYLDRLSLRYEKDGGASQLCGIDIFVTTLDPLKEPPLVTANTILSILAVNYPPEKVSCYVSDDGAAMLTFETLSETSEFARKWVPFCKKFNIEPRAPEWYFAEKVNYLKDKAHPSFVRERRAMKREYEEFRVRINSLVAKARKVPEEGWTMQDGTIWPGNNVDDHPGMIQVFLGQYGGHDTDGNELPRLVYVSREKRPKFKHHKKAGALNALVRVSAVLSNAPYLLNLDYEHYINNSKAIREAMCFMMDPLQGKSVCYVQFSHRFDGADSNDKYNSPSTAFLDINMKGLDGIQGPIYVGTGCVFKRHTLYGYDAPRKKKTPTKTCNCWPKWCCCLCCCLRNKKKKSKNSRFDFEDSSNSKVHDAEISMKDYALTCIEQGTNGVGGNILGETYKPKLWKKFGQSPVLIASTILENGETVKDASLASLLKEAIHVISCSYEVKTDWGKEVGWIYGSNTEDILTGFKMHCHGWRSIYCSPERPAFKVSTPRNLSDGLVQVFKWALGSTEIFLSKHCPIWYGYRGGLKWLERISYINATIYPWTSIPLVAYCTLPAVCLLTGKFIVPQLNNFDGVWFLSLFICIFSTSILEMRWSGVPIDEWWRNEQLWLIEGVSANLFALFLGLFKVMTGIDTKFIAKSKASDEEDKDFAGLFSLNWTTLLIIPTTLLILNLIAIVAGVSHAINDGFESWGPLLGKLLFASWVICHLYPFLKGMMGRQNRTPTIVLVWSILLASFFSVLWVKIDPFLPKSSGPILEECGLYCD 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1700 1063 MobiDBLite consensus disorder prediction 115 153 - -
Acco08g1700 1063 Pfam Zinc-binding RING-finger 34 105 IPR027934 -
Acco08g1700 1063 SUPERFAMILY RING/U-box 30 111 - -
Acco08g1700 1063 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 112 IPR013083 -
Acco08g1700 1063 CDD mRING-HC-C4C4_CesA 39 87 - -
Acco08g1700 1063 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 478 620 IPR029044 -
Acco08g1700 1063 Coils Coil 423 443 - -
Acco08g1700 1063 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 229 1029 - -
Acco08g1700 1063 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Acco08g1700 1063 Coils Coil 92 112 - -
Acco08g1700 1063 Pfam Cellulose synthase 325 1054 IPR005150 GO:0016020|GO:0016760|GO:0030244
Acco08g1700 1063 MobiDBLite consensus disorder prediction 118 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1700 Acco-ChrAcco08 25698229 25706780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1700 7 1062 Glycosyltransferase AT5G09870 62.235 0.0 1384