Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1699 ATGATGAAATGCTTGTCTTTAGATGCTTTTCGGTTTCGCTGTTGTGTCCCTGACCTTCCCTCTATCTTAGGCAAAACTCAAAAGCAAAACATTCCTCTTTGTACTCTTTTCTCGCCCTGTCTTTCCGCTAGAACAGATTTGTCTCCTTCTCTTGCTCTCTCTCCCTCTTTTACCATGGCCGATGAAGATTCAAAGCCAACCCTTTCTATCACCGAGAAGGAAGAATTAGAGCCAACGAAGGTTGCGGCGGAGTCTGATTCACCCGCTGTAGCATCTGCCTCAGCTGTCGAATCCGACTCGGTGGTGGTTAATACTGAAAAATCAGAAATGCCTCCTCCACCGGAGTCGGAATCACCAGCAGCAAAAGCTACTTCGTTTGTAGAGACAGAACCACCGCCACCAACCACTGAAGACAACGATGTAAAATATAAAAGTTCAGACACTAAAGAGGATGCTGGTGAGGCTCAAGATGAGAGATCGAATAAGTTGCCTCAGAACTTGGTTTCGTTCAAGGAAGAGAGCAATTTAGTGGCTGATCTCTCGGATTCTCAGATAAATGCTCTTGAAGAGTTGAAGAAGCTGGTTCGAGAGGCACTAGACACTCATCAGTTCACTTCTTCGGAACCAATCAAAACGACGTCGGTGCCGCCTGAAACCACCCCGGCGGCTAAGGAAGCTGCAAAAGCTGAAGGAGCCACTTCGGAATCAGATGCCAGCACGGAGGTACATCCACCGCCGGAAACCAAAATTGAAGAAAGTCCAGTGAAGGAAGCAGAGGAAGTAGCGAAAGAAACATCCGAGGAACATGTTTTCATATGGGGAATTCCTCTGCTCAAGGATGACAGGAGTGATGTGATTCTGCTCAAGTTTCTTAGAGCCAGAGATTTCAAAGTTAAGGATGCGTTTACCATGATTAAGAACACGATAAGCTGGAGGAAAGAGTTCAACATTGATGCACTTGTGAATGAAGATCTAGGGGATGATCTGGAGAAGGTGGTGTTCATGCACGGTTATGATAGGGAAGGACATCCCGTTTGTTATAATGTCTATGGAGAATTTCAGAACAAGGAGTTGTACCAGAAGACATTCTCAGATGAAGAGAAACGAACCAAGTTCCTCCGTTGGCGGACACAATTTTTGGAGAGGAGTATTAGGAAACTTGATTTTACTCCTGGTGGTGTCAATACCATTTTCCAAGTGAACGACCTTAAAAATTCTCCTGGGCCTGCCAAGCGGGAGCTTCGACTTGCCACCAAACAAGCTTTGCAATTGCTTCAGGACAATTATCCCGAGTTTGTTGCCAAACAGGTTTTTATCAATGTGCCATGGTGGTATCTTGCATTCTACACTATGCTCAGTCCATTTTTGACCCAGAGGACCAAAAGCAAATTTGTTTTTGCAGGCCCACCAAAGTCTGCTGAAACACTTTTCAAGTATATTTCTCCTGAGCAAGTGCCAATTCAATATGGTGGTCTAAGTGTTGATTTATGTGATTGCAACCCAGAATTCAGCATGTCTGATCCAGTCACAGAGATACCTATAAAACCAACAACAAAGCAAACTGTGGAAATCATTATTTATGAGAAATGCATTATTGTGTGGGAGCTGCGAGTAGTGGGCTGGGAGGTCAGCTATAGTGCGGAATTTAAACCTGATGCAAAAGATGGATACACAATTATCATACAGAAGGCCACAAAGATGTCCCCTAATGATGAGCCAGTGGTTTCCAACAGCTTTACAGTTGGTGAACTGGGCAAGATATTTCTTACCATTGACAATTCCACGTTGAAAAAGAAGAGGCTTCTGTACAGGTTCAAGATCAAACCTCTCAGTGATTGA 1839 0.4426 MMKCLSLDAFRFRCCVPDLPSILGKTQKQNIPLCTLFSPCLSARTDLSPSLALSPSFTMADEDSKPTLSITEKEELEPTKVAAESDSPAVASASAVESDSVVVNTEKSEMPPPPESESPAAKATSFVETEPPPPTTEDNDVKYKSSDTKEDAGEAQDERSNKLPQNLVSFKEESNLVADLSDSQINALEELKKLVREALDTHQFTSSEPIKTTSVPPETTPAAKEAAKAEGATSESDASTEVHPPPETKIEESPVKEAEEVAKETSEEHVFIWGIPLLKDDRSDVILLKFLRARDFKVKDAFTMIKNTISWRKEFNIDALVNEDLGDDLEKVVFMHGYDREGHPVCYNVYGEFQNKELYQKTFSDEEKRTKFLRWRTQFLERSIRKLDFTPGGVNTIFQVNDLKNSPGPAKRELRLATKQALQLLQDNYPEFVAKQVFINVPWWYLAFYTMLSPFLTQRTKSKFVFAGPPKSAETLFKYISPEQVPIQYGGLSVDLCDCNPEFSMSDPVTEIPIKPTTKQTVEIIIYEKCIIVWELRVVGWEVSYSAEFKPDAKDGYTIIIQKATKMSPNDEPVVSNSFTVGELGKIFLTIDNSTLKKKRLLYRFKIKPLSD 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1699 612 Gene3D GOLD domain 503 608 - -
Acco08g1699 612 MobiDBLite consensus disorder prediction 242 261 - -
Acco08g1699 612 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 322 497 IPR001251 -
Acco08g1699 612 Pfam CRAL/TRIO, N-terminal domain 268 307 IPR011074 -
Acco08g1699 612 PRINTS Cellular retinaldehyde-binding protein signature 286 308 - -
Acco08g1699 612 PRINTS Cellular retinaldehyde-binding protein signature 449 468 - -
Acco08g1699 612 ProSiteProfiles GOLD domain profile. 502 607 IPR009038 -
Acco08g1699 612 MobiDBLite consensus disorder prediction 205 219 - -
Acco08g1699 612 SMART sec14_4 327 494 IPR001251 -
Acco08g1699 612 CDD SEC14 328 492 IPR001251 -
Acco08g1699 612 MobiDBLite consensus disorder prediction 58 167 - -
Acco08g1699 612 MobiDBLite consensus disorder prediction 205 261 - -
Acco08g1699 612 MobiDBLite consensus disorder prediction 135 158 - -
Acco08g1699 612 SUPERFAMILY CRAL/TRIO domain 332 501 IPR036865 -
Acco08g1699 612 FunFam SEC14 cytosolic factor family protein 327 507 - -
Acco08g1699 612 MobiDBLite consensus disorder prediction 91 105 - -
Acco08g1699 612 MobiDBLite consensus disorder prediction 66 81 - -
Acco08g1699 612 Gene3D - 206 502 IPR036865 -
Acco08g1699 612 PANTHER PATELLIN-1 136 609 IPR044834 GO:0008289
Acco08g1699 612 Pfam CRAL/TRIO domain 332 491 IPR001251 -
Acco08g1699 612 SMART CRAL_TRIO_N_2 283 308 IPR011074 -
Acco08g1699 612 SUPERFAMILY CRAL/TRIO N-terminal domain 176 323 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1699 Acco-ChrAcco08 25648250 25650342 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1699 287 486 Acyl Lipid Metabolism Gene Families AT1G55840 26.540 7.49e-10 58.5