Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1696 ATGGCGGAAGAGCCCAAGAAAGCAGCTGAGGAAGTGGCGGCGGTAGAGGCAGTGACCGAGAAATCTGTTGTTGAAGAGAAAGATGCTGAGAAGCCGGTCATCGAAGCAGAGCCCGAGAAGGAGAAGCCAATCGCTGAGAGCGAGAAAAAAGGTGTAGAGAAGCCGGCGGGGCCCGCTGAGGAAGTTGTGGAGGATGAAAAACCTAAGGCACCAACAGAAGAAAGCAAGATTACTCAGTCTGTTTCTTTCAAGGAGGAGACCTATGTAGTTGCCGACCTCCCTGAATCTCAGAAGAAGGCCCTTGATGAGCTGAAGCAGCTTGTTCAAGAAGCACTGAACAAGCACGAGTTCACTGCTCCTCCTCCGACGGCGGCCAAGGAGGAGGAAGAGAAGAAGGTCCCGGAGATGGTGACTACTGAGGAGCAGAAGGAGGAGGAAGAAAAACCTGCGGCAGCTGAGGAAAAAACTGAAGCAGAGCCTCCTAAGGAGGTTGTTGTTGCAGAGCCAGCTAAGGTTGAGGCTGAAACCGTTACTGAAGAGAAAAAGGAGGAGGAGAAGCTCGCACCTGAAGCTCCGGTCGCCGAAGAGAAAAAGGAGGAGGAAGAAAAGGAGGTGGTTGAAACTGTCACTAAAGAGAAAGAGGAGGAGGAGAAGCCTACCCCTGAAGCTGCTGTTGTCACAGAGGTGGTTGAGAAAGTTTTTACTGAAGTACAGGATGATTCTAAGAAAGTGGAAACAATCAAAGATACCATAGTTTCAGTCTCTGATGAGGCAGCACCTGAAGCTAAGGTTGGTGAGGCCACTGCCCCGGCACCGGAAACGGCGGCGCCTGAAAAGAAAGTGGAGGAGGAGGTGCCTGCGCCACCTCCGCCTCCACCGGAGGAGGTTTCAATCTGGGGAATTCCCCTGCTTGCAGATGAGAGGAGTGATGTGATACTCCTGAAATTCTTGAGGGCTAGAGATTTCAAGGTTAAGGACGCCTTCACGATGATTAAGAACACCGTTCGTTGGCGAAAGGAATTTGAAATCGACGCACTTGTTGAGGAAGATCTTGGGAACGATTGGGACAAGGTGGTGTTCACTCATGGGTATGACAAAGAAGGCCATCCAGTTTGCTACAACGTGTTTGGTGAGTTTGAGAACAAGGAGTTGTATCAGAACACGTTTTCTGATGAGGAGAAGCGCCAGAAGTTCATCAGATGGAGGATTCAGTTCTTGGAGAAGAGCGTCAGAAAATTTGACTATTCTCCTACTGGTATTTCTACAATTGTCCAGGTCAATGATCTTAGGAATTCACCTGGATTGGGTAAGAGGGAACACAGGCTAGCAACCAATCAGGCCCTCCAATTGCTTCAGGATAACTATCCGGAATTCTTAGCCAAGCAGGTGTTTATCAATGTTCCTTGGTGGTACCTGGCCTTTTCAAGGATGATCAGTCCATTCCTGACTCAGAGGACCAAAAGCAAATTTGTATTTGCTGGTCCATCCAAATCTGCTGAAACCCTTTTCAAATACATAGCTCCAGAGCATGTACCTGTCCAGTATGGTGGATTGAGCAGGGAAGGTGACTATGAATTCACAACTGCCGACTCTGTTACCGAGTTTACCATTAAACCATCAACAAAATATGTTATTGAATTCCCTGCTTCTGAGCCAAGCCATCTGATTTGGGAACTGAGAGTTGTGGGTTGGGAAGTGAACTATGGGGCTGAATTCGTGCCAAATGCTGAAGATAGATACACTGTGATAGTACAGAAGAGCCGGAAAATTGGGGTTTCAGACGAAACTATAATCTCTAATGACTTCAAACTTGGGGAACCTGGCAAGGTTGTGCTCACCATTGATAACCAGACATCAAAGAAGAAGAAATTGCTGTACAGGTCCAAGACCAAACCCATCTCTGAGTGA 1908 0.4801 MAEEPKKAAEEVAAVEAVTEKSVVEEKDAEKPVIEAEPEKEKPIAESEKKGVEKPAGPAEEVVEDEKPKAPTEESKITQSVSFKEETYVVADLPESQKKALDELKQLVQEALNKHEFTAPPPTAAKEEEEKKVPEMVTTEEQKEEEEKPAAAEEKTEAEPPKEVVVAEPAKVEAETVTEEKKEEEKLAPEAPVAEEKKEEEEKEVVETVTKEKEEEEKPTPEAAVVTEVVEKVFTEVQDDSKKVETIKDTIVSVSDEAAPEAKVGEATAPAPETAAPEKKVEEEVPAPPPPPPEEVSIWGIPLLADERSDVILLKFLRARDFKVKDAFTMIKNTVRWRKEFEIDALVEEDLGNDWDKVVFTHGYDKEGHPVCYNVFGEFENKELYQNTFSDEEKRQKFIRWRIQFLEKSVRKFDYSPTGISTIVQVNDLRNSPGLGKREHRLATNQALQLLQDNYPEFLAKQVFINVPWWYLAFSRMISPFLTQRTKSKFVFAGPSKSAETLFKYIAPEHVPVQYGGLSREGDYEFTTADSVTEFTIKPSTKYVIEFPASEPSHLIWELRVVGWEVNYGAEFVPNAEDRYTVIVQKSRKIGVSDETIISNDFKLGEPGKVVLTIDNQTSKKKKLLYRSKTKPISE 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1696 635 MobiDBLite consensus disorder prediction 114 224 - -
Acco08g1696 635 PRINTS Cellular retinaldehyde-binding protein signature 475 494 - -
Acco08g1696 635 PRINTS Cellular retinaldehyde-binding protein signature 312 334 - -
Acco08g1696 635 Pfam CRAL/TRIO, N-terminal domain 293 333 IPR011074 -
Acco08g1696 635 Coils Coil 198 218 - -
Acco08g1696 635 SMART sec14_4 352 520 IPR001251 -
Acco08g1696 635 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 348 523 IPR001251 -
Acco08g1696 635 PANTHER PATELLIN-1 141 632 IPR044834 GO:0008289
Acco08g1696 635 MobiDBLite consensus disorder prediction 1 73 - -
Acco08g1696 635 MobiDBLite consensus disorder prediction 1 88 - -
Acco08g1696 635 SUPERFAMILY CRAL/TRIO N-terminal domain 90 350 IPR036273 -
Acco08g1696 635 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 531 627 IPR036598 -
Acco08g1696 635 SMART CRAL_TRIO_N_2 309 334 IPR011074 -
Acco08g1696 635 Pfam CRAL/TRIO domain 357 517 IPR001251 -
Acco08g1696 635 SUPERFAMILY CRAL/TRIO domain 358 519 IPR036865 -
Acco08g1696 635 Gene3D - 278 544 IPR036865 -
Acco08g1696 635 MobiDBLite consensus disorder prediction 258 293 - -
Acco08g1696 635 CDD SEC14 353 518 IPR001251 -
Acco08g1696 635 ProSiteProfiles GOLD domain profile. 525 630 IPR009038 -
Acco08g1696 635 MobiDBLite consensus disorder prediction 121 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1696 Acco-ChrAcco08 25569768 25572796 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1696 313 497 Acyl Lipid Metabolism Gene Families AT5G47730 28.358 1.38e-09 58.2