Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1662 ATGGGTAGAGCTCCTTGCTGCGATAAGGCCAATGTCAAGAAGGGACCCTGGTCTCCTGAAGAAGATGCTCAGCTAAAGGAGTACATAGAGAAACATGGAACTGGAGGCAATTGGATTGCTCTCCCTCAAAAAGCTGGTCTCAAAAGATGTGGGAAAAGCTGTAGACTAAGATGGCTCAACTATCTCCGACCTGACATCAAACACGGCGAGTTCTCCGATCATGAAGATATGATCATCTGCAGCCTCTTTGCGAGCATTGGAAGCAGGTGGTCAGTGATAGCATCTCAGTTGCCAGGTAGGACCGGGGACATTTTGTGA 318 0.4843 MGRAPCCDKANVKKGPWSPEEDAQLKEYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPDIKHGEFSDHEDMIICSLFASIGSRWSVIASQLPGRTGDIL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1662 105 PANTHER OS09G0431300 PROTEIN 1 102 - -
Acco08g1662 105 CDD SANT 16 62 IPR001005 -
Acco08g1662 105 FunFam Transcription factor RAX3 7 68 - -
Acco08g1662 105 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Acco08g1662 105 SUPERFAMILY Homeodomain-like 11 102 IPR009057 -
Acco08g1662 105 Gene3D - 70 104 - -
Acco08g1662 105 SMART sant 67 104 IPR001005 -
Acco08g1662 105 SMART sant 13 64 IPR001005 -
Acco08g1662 105 Gene3D - 6 68 - -
Acco08g1662 105 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Acco08g1662 105 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Acco08g1662 105 ProSiteProfiles Myb-like domain profile. 63 105 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1662 Acco-ChrAcco08 23581148 23581746 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1662 1 101 MYB Transcription Factor Family AT5G57620 84.158 1.19e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco08g1662 Myb_DNA-binding 1.2e-15 CL0123