Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1655 ATGGCAACATACCATCAGAGATTGGGAACTATCAACAGCCTAAAAGCTGTTCAACTTTTGGATCTTCAATATAATGAGCTAAATGGCTTCATTGTTGACGAGACTTGTGAAATTAGAAGACTTGTGAATTTGGACCTCTCCCAAAATAATTTGTCTGCTGAAATCCCTAAATCTTTGGAGTCACTTGTTTATCTCAAGTTTATTAACCTCTCCTTTAATAAACTACACGGAGAGATTCCAAGTGGTGGAGCTTTCAAAAACTTGACTTTTGATTCTTTTATGATGAATGAAGCTCTTTGTGGCCAATCGCGATTAAAAGTACCTCCATGTAGTTATGAAACAAGAAAAAGGTCAAAGACAAATTTCATCTTGTTGAAATCCATATTGCCAATAGTTGCATCAATAATTTTGGTTGCTTTAGGCATTATCCTCTTGCTACCATTCAAACGACAAAATTCAAGCAAGGACCAAGTTCATGAAAGTAATGTATCAACCTTATTAGGAGTGCCAAGAAGGATTTCATATTTTGAAATTCTAGAAGCAACCAATGGATTTGATGAGAGCAACTTGGTTGGAACCGGTAGTTATGGTTCTGTGTTCAAAGGAAAGCTTTTAGATGGGACTATGGTTGCAGTTAAAATATTCAATTTTGATTCAGAAGTAATGTCAAAGAGCTTTGAAGTAGAATGTGAAACAATGCGTAATGTGAGACATCGGAATTTGGTGAAGATCATTGGAAGTTGCTCCAATAATGTTGAGTTCAAGTCTTTGATAATGGAGTTCATGCCCAAAGGAAGCCTTGAAAAATGGTTGAATGTAATGATCGATGTGGCATCTGCTTTGGAGTATCTTCATCATGGCCTAGCAGCACCGGTAGTTCATTGCGATTTAAAGCCAAGTAACATTTTGTTGGATGATGATATGATTGCTCATGTGAGCGACTTTGGAATTTCAAAGCTTTTAGATGAAGGACAATCTAAGACTCAGACAGAAACAATACCTACAGTCGGCTATGTTGCACCAGAGTACGGATCTTTTGGAGTTGTTTCGACAAAAGCAGATGTATACAGTAGTTATGGAATTATGCTAATAGAAGCATTCACAAGGAAGAAACCAGTAGAAGACATGTTTGTTTCTGGAATGAGTTTAAAGAGCTGGGTAAGTAAATCAGTGCCACATGCAGTAATTGAAGTCATAGATTCCAATTTATTACAAGGAGACCAACAACAAATTGGTAATACATTGACATCCACGTCCTCTATTCTTGAATTGGCTCTGAATTGTTGCACTGATATTCCAGAAACACGAAACAATATGACAGATGTTGTAGCATCACTAAAAAAAATCAAGATCATGTTTAAGATGCAACTTGGAAGCATGACATTGAGGACATTTAATGTTTTGTGA 1407 0.3646 MATYHQRLGTINSLKAVQLLDLQYNELNGFIVDETCEIRRLVNLDLSQNNLSAEIPKSLESLVYLKFINLSFNKLHGEIPSGGAFKNLTFDSFMMNEALCGQSRLKVPPCSYETRKRSKTNFILLKSILPIVASIILVALGIILLLPFKRQNSSKDQVHESNVSTLLGVPRRISYFEILEATNGFDESNLVGTGSYGSVFKGKLLDGTMVAVKIFNFDSEVMSKSFEVECETMRNVRHRNLVKIIGSCSNNVEFKSLIMEFMPKGSLEKWLNVMIDVASALEYLHHGLAAPVVHCDLKPSNILLDDDMIAHVSDFGISKLLDEGQSKTQTETIPTVGYVAPEYGSFGVVSTKADVYSSYGIMLIEAFTRKKPVEDMFVSGMSLKSWVSKSVPHAVIEVIDSNLLQGDQQQIGNTLTSTSSILELALNCCTDIPETRNNMTDVVASLKKIKIMFKMQLGSMTLRTFNVL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1655 468 ProSiteProfiles Protein kinase domain profile. 185 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1655 468 SUPERFAMILY L domain-like 11 89 - -
Acco08g1655 468 Gene3D Transferase(Phosphotransferase) domain 1 262 459 - -
Acco08g1655 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Acco08g1655 468 SMART serkin_6 185 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1655 468 Pfam Protein kinase domain 187 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1655 468 Gene3D Phosphorylase Kinase; domain 1 157 261 - -
Acco08g1655 468 FunFam Serine-threonine protein kinase plant-type 167 261 - -
Acco08g1655 468 PANTHER OS04G0122200 PROTEIN 13 451 - -
Acco08g1655 468 SUPERFAMILY Protein kinase-like (PK-like) 160 447 IPR011009 -
Acco08g1655 468 ProSitePatterns Protein kinases ATP-binding region signature. 191 213 IPR017441 GO:0005524
Acco08g1655 468 Gene3D Ribonuclease Inhibitor 6 119 IPR032675 -
Acco08g1655 468 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 257 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1655 Acco-ChrAcco08 23365580 23370938 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1655 10 453 Receptor kinase-like Gene Family AT3G47090 36.495 1.24e-87 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco08g1655 Pkinase 1.3e-37 CL0016