Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1648 ATGGGATCATCAAAACCCACTGTTACAAGCCCTGGACTTCTGCTCATCTTCTGCGTCGTTATTCTGATCAGTTTCATAAGAGTAAGTACTGCTCAAGCACCAAACTACGTTGGAGATGACTGCCATAACAAAACCCCACAAGCACTAACAGATTCCTACAAAGCTAACCTTAACCAGCTCCTCTCATGGCTCTCGACCGACGCAGCCACAAGCAAAGGCTATAACCATACATCCTTTGGCAACGCCACCAACGCTGTCTATGGCCTCTATGACTGCCGTGGTGACGATGCGGGATACTTCTGCCAGTTCTGTGTCTCCACTGCCACTAGAGAGGTTCTCCAACGTTGTCCCAATCAGCCTTCTGCTGTGATATGGTATGACTTCTGCATCTTACGATACTCTAATGAGAACTTCTTTGGGAAGGTGACGACAAGCCCATCGTGGTCTGCCGGAAGAGGACAGGCGTCTGATCCGACGGAGGGGAAGCAGGCGGAGAGTTTCATGAGGAGCCTAATCGGAAAAGCGATGGAGAACACAACGGAGCTGGGCGCTAGAGGAGAGTTTGATTTGGGTGGTGGAAGAAAAAGGTATGCATTGGTACAGTGCAGTAGAGACCTTAACAGTGAAGGATGCAAAGAATGTTTGGAATCTATGATCGATAGGATTTCTCAGTGCTGTGAGAAGGAGCAAGGATGGCAGGTTTTGGCGCCAAGCTGTATCATCAAATATGATAATTACATGTTTTATCAATCAACCTCTTCACTTAATAATGCTCCTAATCAGACAACTACAGCCAAAAAAGGAGTTAGCAAGTCAAAAGCCTTGATCATAAGCATAAGTGTACTAGTGGCTGTGGTTATAATAAGTTTCTCTGTCTACTTTTGGCGAAAGAAGAATAGAAAAGATGAAATGCCGTTGGAGAGGGCTCATGTGTTTGACGATATCTCTCAAAAAGAGAGTTCATTGAACACAGACCTTCCCACAATTCCTCTATCTGTGATTCAACAAAGTACACATAATTTCTCAGGAAAAGCTAAATTGGGGGAGGGAGGATTTGGTCCCGTTTACAAGGGGACAATGCCCGATGGGCAGGAGATTGCTGTGAAAAGACTCTCCCAAACTTCGGGTCAAGGTTTGGAGGAGTTCAAGAATGAAGTTATATTCATAGCGAAACTGCAACACAGAAGCCTTGTTAGACTTTTGGGTTGCTGCATCGAGGAAAATGAAAAGCTTCTCGTATATGAGTATATGCCAAACTCAAGTCTTGATTTCCACCTTTTCAATGAAGAAAATAGAAGCAAACTAGATTGGAAACAAAGGCTGCATATTATTAATGGGATTGCAAAAGGTCTTTTGTATCTTCATGAAGACTCTCGACTCAAAGTAATTCATAGAGATTTGAAAGCTAGTAATGTCCTTTTAGATTGTGATATGAACCCAAAAATATCTGATTTTGGATTGGCAAGAACCTTTGATGGAGCCCAAAATCAAGAAGAAACAAGACGAGTAATGGGAACTTATGGTTATATGGCTCCGGAATATGCAATGGGAGGGTTGTTTTCAATAAAATCAGATGTTTTTAGCTTTGGAGTGCTTCTTCTAGAAATCATTTGTGGGAGGAGAAGTACTGGTTTCCATCACTCTGATCATGGCCAAAGTCTTCTTATTTATACATGGAATCTGTGGCGTGAAGGCAAATGTTTGGAATTGATGGACCCAATGCTGGAAGATTCTAACCTTGATAAAGGTGAAGTTTTGAAATGCATACACATTGGATTGCTTTGTGTTCAAGAAGATGCATCACATAGACCAACCATGTCCACTGTTGTCGTCATGCTTGCAAGTGACACAATGACCTTTCCCAAGCCAAATCGTCCTGCATTTTCAGTAGGAAGAATGTTCCCAGGATATTCATCGTCTACATCAAAAAATTCCAAAGATCCTTCTGTTAATGAAGTAACAATGTCACTCATCTCACCCAGGTGA 1986 0.425 MGSSKPTVTSPGLLLIFCVVILISFIRVSTAQAPNYVGDDCHNKTPQALTDSYKANLNQLLSWLSTDAATSKGYNHTSFGNATNAVYGLYDCRGDDAGYFCQFCVSTATREVLQRCPNQPSAVIWYDFCILRYSNENFFGKVTTSPSWSAGRGQASDPTEGKQAESFMRSLIGKAMENTTELGARGEFDLGGGRKRYALVQCSRDLNSEGCKECLESMIDRISQCCEKEQGWQVLAPSCIIKYDNYMFYQSTSSLNNAPNQTTTAKKGVSKSKALIISISVLVAVVIISFSVYFWRKKNRKDEMPLERAHVFDDISQKESSLNTDLPTIPLSVIQQSTHNFSGKAKLGEGGFGPVYKGTMPDGQEIAVKRLSQTSGQGLEEFKNEVIFIAKLQHRSLVRLLGCCIEENEKLLVYEYMPNSSLDFHLFNEENRSKLDWKQRLHIINGIAKGLLYLHEDSRLKVIHRDLKASNVLLDCDMNPKISDFGLARTFDGAQNQEETRRVMGTYGYMAPEYAMGGLFSIKSDVFSFGVLLLEIICGRRSTGFHHSDHGQSLLIYTWNLWREGKCLELMDPMLEDSNLDKGEVLKCIHIGLLCVQEDASHRPTMSTVVVMLASDTMTFPKPNRPAFSVGRMFPGYSSSTSKNSKDPSVNEVTMSLISPR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1648 661 Gene3D Phosphorylase Kinase; domain 1 306 416 - -
Acco08g1648 661 Gene3D Transferase(Phosphotransferase) domain 1 417 621 - -
Acco08g1648 661 Gene3D - 35 138 IPR038408 -
Acco08g1648 661 Gene3D - 151 248 IPR038408 -
Acco08g1648 661 SUPERFAMILY Protein kinase-like (PK-like) 323 613 IPR011009 -
Acco08g1648 661 Pfam Protein tyrosine and serine/threonine kinase 344 612 IPR001245 GO:0004672|GO:0006468
Acco08g1648 661 SMART serkin_6 341 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1648 661 FunFam cysteine-rich receptor-like protein kinase 10 417 620 - -
Acco08g1648 661 FunFam Cysteine-rich receptor-like protein kinase 28 37 137 - -
Acco08g1648 661 CDD STKc_IRAK 347 613 - -
Acco08g1648 661 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Acco08g1648 661 MobiDBLite consensus disorder prediction 638 661 - -
Acco08g1648 661 Pfam Salt stress response/antifungal 164 246 IPR002902 -
Acco08g1648 661 Pfam Salt stress response/antifungal 41 135 IPR002902 -
Acco08g1648 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Acco08g1648 661 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 307 416 - -
Acco08g1648 661 ProSiteProfiles Protein kinase domain profile. 341 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1648 661 Pfam Domain of unknown function (DUF3403) 615 661 IPR021820 GO:0004674
Acco08g1648 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 660 - -
Acco08g1648 661 ProSiteProfiles Gnk2-homologous domain profile. 35 138 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1648 Acco-ChrAcco08 23146310 23153009 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1648 20 661 Receptor kinase-like Gene Family AT4G05200 41.317 5.14e-174 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g1648 PK_Tyr_Ser-Thr 2.7e-48 CL0016