Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1639 ATGGATGCCTCATCCAGTACATGTGAGATAATCGAATCAAGAGAGGAGATTATTTCTGAGTCCAGAATGGATGAAAAAGCTGAGAGTAGTTGTGCCCACAGAGCAGGGAAAAAGTATTCTGTGGAGGATGATATTGATCGCCTCTTTCAAGCTATTGACTTCAAAAATTCAGCTAGAGGTTCTAATACACCACGTTCTCAAAAGAGTGCTCTTAAAAGGCCAATAAAAGTCAGTTCGTCTCAGGCATCAGGAATTGGGATTGCAGAGCCTGTAAGCTTAAAGCAGGCACTTAGAGGACTTTGCATATCTCAGGCATCAGAGATGGCTGCTTTGAAGCGACTATCAAAGCCATCGAGTTCATCTAGAGCATCTGAGGCAGGAACTATTAAGAAGCTGTATACAGCAGTTGTAGATGAGGGGAAAGGAAACTTGGTGGAAATCTCCCTTGTGCCCGAGATATCTGCACCTTCTGGTAAAATGCCTAGGGAAGATAAGTCAAGTTCAAGTGCTGATCATTCTACTCATTTTGTTGATGTAACAAACAGAAAAACAGTCACAACAAGGGTAGCATCCCGGGATCAGATTGTTCCTCTTCAACCAGAAGGTGGAAGTGAGAAGTTAGTCACAGTTGCCGGAAAACCTGTACCTCCAAATCCATCCTCAGTTGATTATGGAAGTGAGGAAATATCTGAGGTTAAGATTGTCTCTGCTTCCTCAAGCAAAGCTTCCCACTGCTCTACAATGCTTGATAAGGGGCAGGAAGTAGACTTACATTCTGAGTCTAATCAACCAAGCTCTAGTACGAGCAGTGGAGTGGAGAAATCCACAAGCAGTACTACATGTTTGTCAAAGCCAATGTTCAGGAACATGAGCTTCCTTAGGAAAAAAGTAAAGCAAGAATTATGTTCTACCTCAAGTGGCTCCACACTATGTACCAGAAAAGTTGACAATGACTTGGATCCTAGTACGAGTCATTTGAACAAGGAGGCTGATAAATATAATTTGAAGCAGGAAATGAAAGAAAATGACAAGTTGTCTCCCAGCAGTTCAAGTCACAGTGTTGAAGTAAATTCAAATATTGTGGGTGCAGATTCAATGAAAACTGGTTTCAGTATGAATTGCAGTAAGAAAACTAAATTTCTAGTAGCAAAAATTGATGAAAAATCAAGATCAAAAGAAAAGGGTGAATTTTCCCAGAGCTCAAAAAGCAGCATTGGTGAGTATAGTAGCAGCACAACGACAAGCACAAGTGAAGAGAGCAATCTGAGTGGTTCTAGTCGCAGTGGCCACAGGCCTCACATGTCAAAACACTTGAGATGGGAAGCTGTTCGTGCTATTCAGCAGCAGCATGGGAACTTAATTTTGAAGCACTTCAAACCGCTAAGGAGGCTAGGTTGTGGGGACATTGGAACTGTTTATCTTGCAGAATTAATTGGTACAAGCTGTCTTTTTGCTTTGAAAGTGATGAATAATGAGTTTTTGGCCAACCGCAAGAAAACATTCAGGGCCCAAACTGAGAGAGAGATCCTGCAGATGCTGGATCATCCTTTTCTTCCTACACTGTATGCCTGTATTACAACTGATAAGCTCTCTTGCTTGGTTATGGAGTATTGCCCAGGTGGAGATCTACATGTGCTGCGCCAGAGGCAACCATATAGGAGTTTCTCAGAACAAGCAACCAGGTTTTATGTTGCTGAAGTTCTCCTTGCCCTGGAGTATTTGCACATGTTAGGAGTAATATATCGAGACCTGAAGCCTGAAAATATCCTTGTTAGAGAAGATGGCCACATTATGATGACAGATTTTGACTTATCACTTAGGTGTTCTGTGAATCCAACGTTAGTCAAGTCATCTTCACCGGATGTGGATTCAACAAAGAAGATGTCCAGTCCCTGTTCAGAGGCTAGCTGCATACACCCTTTCTGTCTACAACCTGACTGGCAAGTGTCCTGTTTCACTCCTATTCTTATATCTGCTGGAGCAAAATCTCGAAAGATGAAGTCTGAGGCTGCCCAGGTTGGTCCCCTGCCACAACTCGTCGTTGAGCCAACCAGTGCCCGCTCTAACTCATTCGTTGGTACCTACGAATACCTTGCTCCAGAGATCATCAAAGGCGAGGGCCATGGGAGTGCTGTGGATTGGTGGACTTTTGGTATATTTTTGTTTGAGCTTTTGTATGGCAAGACTCCCTTTAAAGGAGCTGGAAATGAGGAAACACTATCCAATGTTGTGTCACAAAGCCTCAAGTTCCCAGATGCTCCTATTGTCAGTTTTCATGCAAGAGATCTGATACGCGGATTGTTGATAAAAGACCCGGAGAACCGGTTAGGTTCTGTAAAAGGCGCCGCAGAGATAAAACAACACCCTTTCTTTGAAGGCCTAAACTGGGCTCTGATAAGATGTGCAGCACCACCTGAGCTGCCCAGGTTTCGTGAGTTTGGAAGTTGTGTTCCTTCCATGGCTTCACATAAGGAGAATGCGAATGACTTAGAGGATACAGAAGATTGTGAGGAGTTTGAGCTGTTTTAG 2529 0.4322 MDASSSTCEIIESREEIISESRMDEKAESSCAHRAGKKYSVEDDIDRLFQAIDFKNSARGSNTPRSQKSALKRPIKVSSSQASGIGIAEPVSLKQALRGLCISQASEMAALKRLSKPSSSSRASEAGTIKKLYTAVVDEGKGNLVEISLVPEISAPSGKMPREDKSSSSADHSTHFVDVTNRKTVTTRVASRDQIVPLQPEGGSEKLVTVAGKPVPPNPSSVDYGSEEISEVKIVSASSSKASHCSTMLDKGQEVDLHSESNQPSSSTSSGVEKSTSSTTCLSKPMFRNMSFLRKKVKQELCSTSSGSTLCTRKVDNDLDPSTSHLNKEADKYNLKQEMKENDKLSPSSSSHSVEVNSNIVGADSMKTGFSMNCSKKTKFLVAKIDEKSRSKEKGEFSQSSKSSIGEYSSSTTTSTSEESNLSGSSRSGHRPHMSKHLRWEAVRAIQQQHGNLILKHFKPLRRLGCGDIGTVYLAELIGTSCLFALKVMNNEFLANRKKTFRAQTEREILQMLDHPFLPTLYACITTDKLSCLVMEYCPGGDLHVLRQRQPYRSFSEQATRFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMMTDFDLSLRCSVNPTLVKSSSPDVDSTKKMSSPCSEASCIHPFCLQPDWQVSCFTPILISAGAKSRKMKSEAAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGKTPFKGAGNEETLSNVVSQSLKFPDAPIVSFHARDLIRGLLIKDPENRLGSVKGAAEIKQHPFFEGLNWALIRCAAPPELPRFREFGSCVPSMASHKENANDLEDTEDCEEFELF 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1639 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Acco08g1639 842 CDD STKc_phototropin_like 456 809 - -
Acco08g1639 842 MobiDBLite consensus disorder prediction 56 75 - -
Acco08g1639 842 MobiDBLite consensus disorder prediction 303 317 - -
Acco08g1639 842 MobiDBLite consensus disorder prediction 14 36 - -
Acco08g1639 842 ProSiteProfiles Protein kinase domain profile. 458 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1639 842 MobiDBLite consensus disorder prediction 391 434 - -
Acco08g1639 842 FunFam serine/threonine-protein kinase D6PK-like 686 809 - -
Acco08g1639 842 PANTHER FLIPPASE KINASE 1-RELATED 266 810 - -
Acco08g1639 842 MobiDBLite consensus disorder prediction 236 280 - -
Acco08g1639 842 Gene3D Transferase(Phosphotransferase) domain 1 685 808 - -
Acco08g1639 842 SUPERFAMILY Protein kinase-like (PK-like) 431 811 IPR011009 -
Acco08g1639 842 MobiDBLite consensus disorder prediction 155 175 - -
Acco08g1639 842 SMART serkin_6 458 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1639 842 MobiDBLite consensus disorder prediction 258 280 - -
Acco08g1639 842 FunFam serine/threonine-protein kinase D6PK-like 542 609 - -
Acco08g1639 842 FunFam Serine/threonine-protein kinase D6PK-like 456 541 - -
Acco08g1639 842 Gene3D Transferase(Phosphotransferase) domain 1 538 607 - -
Acco08g1639 842 Gene3D Phosphorylase Kinase; domain 1 456 537 - -
Acco08g1639 842 MobiDBLite consensus disorder prediction 303 328 - -
Acco08g1639 842 Pfam Protein kinase domain 460 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1639 842 Pfam Protein kinase domain 688 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1639 842 MobiDBLite consensus disorder prediction 398 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1639 Acco-ChrAcco08 22924576 22928408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1639 366 842 AGC Kinase Gene Family AT3G52890 65.031 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Acco08g1639 Pkinase 9.7e-36 CL0016