Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1622 ATGTCCAAGGCATCTTCTTTCTCTCTCACCTTCCTCTGCTTCTCTCTCATCATCTTCATTTCCGCCATAGCCGCCACTCCCTCAAGCTTCATCAAATCCTCTTGCAGCACCACAACGTACCCTTCGATCTGCGTCGAATCTCTCTCTTCCTACGCCTCTTCCATCCAACAAGACCCTCACCAGCTGGTCCAAACCGCTCTATCTATCAGCCTCAACACCACGCTCTCCACGAAATCCTTCGTCTCCAAGCTCAACAAGTTCAGAGGCCTCAATAACAGAGAGAATCAGGCTCTCCGAGACTGCGTGGAAGAGATCGGTGACAGCGTCGATCGGCTCAGCCGATCTATCAAGGAGCTCCAGCTCTGCGATAAATCCAAGGGTCCGGACTTCCAGTGGCACATTAGCAATGTCGAGACGTGGGTGAGCTCTGCAATAACCGATGAGAGTACTTGCAACGATGGATTCGCCGGAAGGGCTTTGAACGGAAGAATCAAGAGTTCTATAAGGACCAGAATGCTTCGTGTTGCTCAGGTCACTAGTAATGCTCTTTCTCTCATCAATCACTACGGGTCTAAACACTATTGA 585 0.5026 MSKASSFSLTFLCFSLIIFISAIAATPSSFIKSSCSTTTYPSICVESLSSYASSIQQDPHQLVQTALSISLNTTLSTKSFVSKLNKFRGLNNRENQALRDCVEEIGDSVDRLSRSIKELQLCDKSKGPDFQWHISNVETWVSSAITDESTCNDGFAGRALNGRIKSSIRTRMLRVAQVTSNALSLINHYGSKHY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1622 194 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 189 IPR035513 -
Acco08g1622 194 FunFam Pectin methylesterase inhibitor 1 26 189 - -
Acco08g1622 194 NCBIfam pectinesterase inhibitor domain 5 189 IPR006501 GO:0004857
Acco08g1622 194 Pfam Plant invertase/pectin methylesterase inhibitor 29 185 IPR006501 GO:0004857
Acco08g1622 194 Gene3D Invertase/pectin methylesterase inhibitor family protein 25 189 IPR035513 -
Acco08g1622 194 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 185 - -
Acco08g1622 194 SMART PMEI_2 26 185 IPR006501 GO:0004857
Acco08g1622 194 CDD PMEI-like_3 33 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1622 Acco-ChrAcco08 22564986 22565570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1622 26 188 Carbohydrate Esterase AT3G14310 28.916 5.26e-20 85.1