Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1619 ATGAAGGCCTTTTCTTCTACTAACCATATTCTTTTTATCTCCATTTTCATTTCTTCAATATTCTCAATCTCATCTTCTGAGCGAAAACCGTACCAAGATGCCAACACACAGTTCATCAGAACCTCTTGTGACTCCACAACCTACCCAAGGCTCTGCTTCGCCTCCTTATCCAAGCACGCCGCCTTCATACAAACCGACCGCATGCTCCTCACCGGCACTGCGTTGAACGTGACTCTGGCGGCAGTGAAGGCAACATCAGCAATGATGTCGTCACTGTCCAAGAGCTTCGGTGGCAGTATGAAGCCAAGGGAGGCCGCCGCAATGAGCGACTGTGTGGAGGAGCTGAGTGATTCGATGGACGAACTCAGAAAGTCCATTGGTGAGATGGGTCAACTCGGAGGCTCCTCCAACTTTGAGCTGACCAAGAATGATGTTCAGACTTGGGTTTCTGCTGCTTTGACTGATGAGAGCACTTGCACTGATGGGTTTGAAGAACTTAATAATAATGGGACTCTGAAGAACACTGTGAGAAGCCGAATTGTTCAGGTGGCTCATCTTACTAGTAATGCCTTGGCTTTCATAAATCAGCTTGCAGCTTCTTCACATGCTTAA 612 0.4755 MKAFSSTNHILFISIFISSIFSISSSERKPYQDANTQFIRTSCDSTTYPRLCFASLSKHAAFIQTDRMLLTGTALNVTLAAVKATSAMMSSLSKSFGGSMKPREAAAMSDCVEELSDSMDELRKSIGEMGQLGGSSNFELTKNDVQTWVSAALTDESTCTDGFEELNNNGTLKNTVRSRIVQVAHLTSNALAFINQLAASSHA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1619 203 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 193 - -
Acco08g1619 203 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 197 IPR035513 -
Acco08g1619 203 SMART PMEI_2 34 193 IPR006501 GO:0004857
Acco08g1619 203 Pfam Plant invertase/pectin methylesterase inhibitor 38 192 IPR006501 GO:0004857
Acco08g1619 203 NCBIfam pectinesterase inhibitor domain 10 197 IPR006501 GO:0004857
Acco08g1619 203 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 199 IPR035513 -
Acco08g1619 203 FunFam Pectinesterase inhibitor 3 34 198 - -
Acco08g1619 203 CDD PMEI-like_3 41 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1619 Acco-ChrAcco08 22459729 22460340 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1619 39 197 Carbohydrate Esterase AT1G53830 29.560 6.35e-21 88.2