Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1609 ATGCTGGTTCAATTAACACTAGAACAAGCGCAAGCCATGCATAAGGAAGCTGAAGAATATGGCCCTAAATGTGTCACCAAGATGCAGAAATGTGTATTCAGTGATTGCTTGAAGCTCTACGACAATACCATCTTCCATCTCAACCGAACCCTTCAAGCCCTAACTACAGCTTCTTGCTCGCTATCAGACGCACAAACTTGGCTCAGCACTGCATTAACAAACATCGAAACTTGCCGGAGCAGCGCGTTGCTACTCAAAGTCGGAGAGTTTACTGCTCAAAGTAATGTAACCAGCAATGTTGGAAAGATGATAAGAAATTTGTTGGCTGTTAATGGGAAATTCCTAAAGCAAGAGAACTTCACAGAAGAAGAGATAAAAGCACACGGGTTTCCAAGTTGGTTTTCTGGGCACGACAGGAGGTTGTTGAGCTCGAGGCGATCATCGGTGATGGCAAATCTAGTGGTGGCTCAAGATGGTACCGGCCATTTCAAGACGGTGCAAGCCGCCATTGATGTGGCATCAAGAAGAAAAGTGAAGACGAGGTTTGTGATAAGAGTGAAGAAAGGGATTTATGAAGAGAATATTGAAGTTGATAAGGATAATGAAAATCTCATGATTATTGGTGATGGAACGAGAGTGACCATTATAACGGGTAGTAAGAGTGTCAAAGATGGAATTACCCCGGCTAGCTCCGCAACCGCAGGTATAGATGGTGCTTACTTCATTGCTCGAGACATCACTTTTAGAAACACCGCTGGTGCTGAAAAAGGTCAAGCCGTGGCACTCCGATCGGCCTCTGACCTCTCCGTCTTCTATCGGTGTTCCATTGAAGGCTATCAAGACACTCTAATGGCTCATGCACAACGCCAGTTCTATAGAGACTGTAGAATTTTTGGCACAGTGGATTTCATTTGGGGCAATGCTGCAGTTGTTCTACAAAACTGCAGAATTCTTGTAAGAAAGCCACTTCAAGGACAAGCAAACATGATCACAGCACAAGGACGAGGCGACCCCTATCAAAACACCGGTATATCAATAATCAATTCTCAAATCCGAGCTGCACAAGACTTCAGGACGGTTTATCACTCATATGAAACCTATTTGGGGCGGCCATGGCAGCAATATGCTCGAGTGGTGATCATGAAAACTTACATCGAAGGCTTGGTGAATCCATTGGGATGGTCTGCATGGGATGATAGTAATTATGCTCAAGATACATGTTATTTTGGGGAATATATGAACTATGGAGCTGGTTCTTCCACAAAAACTAGAGTACAATGGCCTGGCTTTCATGTGATAAGTAATCCAAATGAGGCAAACCAGTTCAGTGTCGCAAATCTCCTTGCTGGTCACACATGGTTGCCTCGCACTGGGGTACCATTTACCATTGGTGTTAATTAA 1401 0.4418 MLVQLTLEQAQAMHKEAEEYGPKCVTKMQKCVFSDCLKLYDNTIFHLNRTLQALTTASCSLSDAQTWLSTALTNIETCRSSALLLKVGEFTAQSNVTSNVGKMIRNLLAVNGKFLKQENFTEEEIKAHGFPSWFSGHDRRLLSSRRSSVMANLVVAQDGTGHFKTVQAAIDVASRRKVKTRFVIRVKKGIYEENIEVDKDNENLMIIGDGTRVTIITGSKSVKDGITPASSATAGIDGAYFIARDITFRNTAGAEKGQAVALRSASDLSVFYRCSIEGYQDTLMAHAQRQFYRDCRIFGTVDFIWGNAAVVLQNCRILVRKPLQGQANMITAQGRGDPYQNTGISIINSQIRAAQDFRTVYHSYETYLGRPWQQYARVVIMKTYIEGLVNPLGWSAWDDSNYAQDTCYFGEYMNYGAGSSTKTRVQWPGFHVISNPNEANQFSVANLLAGHTWLPRTGVPFTIGVN 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1609 466 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 114 IPR035513 -
Acco08g1609 466 SUPERFAMILY Pectin lyase-like 151 464 IPR011050 -
Acco08g1609 466 Gene3D - 146 465 IPR012334 -
Acco08g1609 466 SMART PMEI_2 1 110 IPR006501 GO:0004857
Acco08g1609 466 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 114 IPR035513 -
Acco08g1609 466 PANTHER PECTINESTERASE 7 455 - -
Acco08g1609 466 CDD PMEI-like_3 1 116 - -
Acco08g1609 466 Pfam Plant invertase/pectin methylesterase inhibitor 2 109 IPR006501 GO:0004857
Acco08g1609 466 FunFam Pectinesterase 146 465 - -
Acco08g1609 466 NCBIfam pectinesterase inhibitor domain 3 110 IPR006501 GO:0004857
Acco08g1609 466 Pfam Pectinesterase 152 450 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1609 Acco-ChrAcco08 22155021 22156795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1609 1 465 Carbohydrate Esterase AT3G47400 55.085 0.0 536