Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1608 ATGGCATCATTCATTGTTAAGCTATTCTGCTCACTCACCTTATCTTCTTATCTTTTCTCAATATCATTATCATCTTCTTCAAGAACATCATCTTCGTCTATAGATTTTTGGTGCAACCAAACTCCTCATCCTCAGCTATGCAAATACCACATGAGCAACAAGCACCACTGGTTCAGACCGAACCACCGGTCCGAGTACAAAAAAATGCTGGTTCAGTTAGCCATGGAACAAACTCAAGCTATGCATAAGGAAGCTCAAGAATATGGCCCAAAATTTGTGACCACAACGCAAAAATGTGTGTTCAATGAATGTTTAAAGCTCTACGATAACACCATCTTCCATCTAAACCAAACCCTTCAAACCCTACATACTTCTTCCTCCTTATTAGATGCACAAACATGGCTCAGTACTGCCCTCACATACATCGAAACCTGCCATAGCACTGCGTTACAGCTTGGAGTTGGAGAATTCACAGCTCAAAATAATGCGAGCCACAGAGTTAGGAAGATGATAAGCAACGTATTAGCCGTAAACGATGAGATTATGAAGCAAGAGAATAAAAACACACAGAGAAAAGCAAGTGGGTTTCCAAGTTGGTTTTCTGGGAAGCACAGGAGGCTGTTGAGCTTGAGTTCATCTTCTTTGAAGGCAAATATTGTGGTGGCTCAAGATGGTACGGGCCATTTTAAGACAGTGCAAGCTGCCATTGATGAAGCTTCAAGGAGAACGGTGAAGACGAGGTTTGTGATACGATTGAAGAAAGGGATTTATGAAGAAAATATTCAAGTTGAAAAGAAAAATGAAAATCTCATGATTGTTGGTGATGGAATGGAACTTACCATTATAACTGGTAATAGAAGCGTTAAAGATGGAATTACCCCCTCTATGTCTGCAACAGCAGGTATAGATGGCGCTCACTTCATTGCAAGAGATATCACTTTTAGAAACACGGCCGGTCCAGAGAAAGGTCAAGCCGTGGCACTCCGATCAGCATCCGACCTCTCGGTCTTCTATCGATGCTCCATTGAAGGCTATCAAGACACACTAATGGCTCATGCACAACGTCAATTCTATAGGGACTGTAGAATTTTTGGCACAGTGGATTTTATTTGGGGTAATGCCGCAATGGTCCTACAAAACTGCACCATTCTCGTAAGAAAGCCCTTACAAGGACAAGCAAACATGATCACGGCTCAAGGACGAGATGACCCGTTTCAGAACACTGGAATATCTATAATCAACTCTCAAATTCGAGCCGCACCGGATCTCAGACCGGTCATAAAGGCATACAAAACCTATTTGGGTCGGCCATGGAAGCAACATGCACGAGTGGTTGTCATGAAAAGCTACATTGAAGGATTGGTGAATCCATGTGGTTGGTCTCCATGGGACGATAGTGATTTTGCTCAAGATACGTTGTATTTTGGGGAATATATGAACTATGGAAATGGTTCTTCAACAAAAGATAGGGTTCAATGGCCTGGGTTTCATGTCTTGACGAGCCAGAATGATACACAACAGTTTACTGTTGCTGGACTTCTTGCTGGTGACACATGGTTGCCTGAAACCGGTGTGCCTTTTGATGTTGGTATCTAA 1596 0.4248 MASFIVKLFCSLTLSSYLFSISLSSSSRTSSSSIDFWCNQTPHPQLCKYHMSNKHHWFRPNHRSEYKKMLVQLAMEQTQAMHKEAQEYGPKFVTTTQKCVFNECLKLYDNTIFHLNQTLQTLHTSSSLLDAQTWLSTALTYIETCHSTALQLGVGEFTAQNNASHRVRKMISNVLAVNDEIMKQENKNTQRKASGFPSWFSGKHRRLLSLSSSSLKANIVVAQDGTGHFKTVQAAIDEASRRTVKTRFVIRLKKGIYEENIQVEKKNENLMIVGDGMELTIITGNRSVKDGITPSMSATAGIDGAHFIARDITFRNTAGPEKGQAVALRSASDLSVFYRCSIEGYQDTLMAHAQRQFYRDCRIFGTVDFIWGNAAMVLQNCTILVRKPLQGQANMITAQGRDDPFQNTGISIINSQIRAAPDLRPVIKAYKTYLGRPWKQHARVVVMKSYIEGLVNPCGWSPWDDSDFAQDTLYFGEYMNYGNGSSTKDRVQWPGFHVLTSQNDTQQFTVAGLLAGDTWLPETGVPFDVGI 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1608 531 Pfam Pectinesterase 218 517 IPR000070 GO:0030599|GO:0042545
Acco08g1608 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 181 IPR035513 -
Acco08g1608 531 SUPERFAMILY Pectin lyase-like 214 529 IPR011050 -
Acco08g1608 531 NCBIfam pectinesterase inhibitor domain 9 180 IPR006501 GO:0004857
Acco08g1608 531 SMART PMEI_2 29 177 IPR006501 GO:0004857
Acco08g1608 531 CDD PMEI-like_3 37 183 - -
Acco08g1608 531 Gene3D - 212 531 IPR012334 -
Acco08g1608 531 FunFam Pectinesterase 212 531 - -
Acco08g1608 531 Pfam Plant invertase/pectin methylesterase inhibitor 33 176 IPR006501 GO:0004857
Acco08g1608 531 PANTHER PECTINESTERASE 19 521 - -
Acco08g1608 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 182 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1608 Acco-ChrAcco08 22131135 22133005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1608 37 531 Carbohydrate Esterase AT5G51490 53.770 0.0 554