Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1586 ATGGTAGTTAGAAGAGAGGGCATTGTGATTCTGTGTTTCACTCATTCATGTCCACCAACAAAAAACACACTCAAGCAAACTCGTCATCATGAAACTCCCTCTGCTACCAGCAGCACACTCAAAAAGCACTTCCCTTCTTCTTCTTCCTCATCATCATCATCATCGTCAATTCAATCCCTCCTTTCTCCTTTTAAATCAACCTCCTTCATCCTCATCCTCATCCTCACACCCTGTTCTTCTTCAACACCACCAGCCATGAAAATTCCTTCTCTTTTCCCCCTCACATTCTTCTTCTTCTTCTGTCAGATACAGCTTCTGGTTTTTTCTGCTACTCCATCTGTCATCTTCTCTTTGCTTTCTCTCAAGGCTTCCCTCATTGACCCTCACAATACCCTCCATGACTGGAACTATTCTTCTTCTTCTTCCTCTAACGATTCTTCCCCAGACCCACCACATGTTTGGTGTTCATGGTCAGGTATCACGTGCCTTGCACGGACTTCTCAGATCATAGCCATTGACCTTTCTCAGCGTAATCTCTCTGGTTCAATCTCTCCCCAAATCCGTTTCTTGACTAGCTTGAACCACTTGAATCTCAGCTGGAATGATTTCACTGGGATTTTCCCACCTGTGATTTTTGACCTCTCTGAGCTCAGAACTCTGGATATCAACCACAACTACTTCAATTCAACTTTCCCTCCAGGGATTTCCAGGCTCAAGTTCTTAAGAGTGTTCAATGCTTATAGCAATAACTTTATTGGTCCTCTGCCTCAGGAATTCATGAGGCTTCGGTTTCTTGAGAAGTTGAACCTTGGTGGGAGCTACTTCAATGGTACAATTCCTTCAGGTTATGGGAATTTACTACGATTAAAGTTCCTTTATCTTGCTGGGAATCTCTTAGAAGGTCCAATACCATTTCAGTTAGGGTTCTTATCAGAATTGGAACGCCTTGAAATTGGGTACAACCAGTTTTCTGGAGGATTACCTGGAGAATTTGCATTATTATCAAGTCTGAAATATTTGGATATTGCTTCTTCTAATCTCTCTGGCTCTCTGATTCATGATTTGGGAAACATGACTATGTTGGAGACATTGTTGCTGTACAAGAATCAGTTAGTGGGTGAGATCCCATCGAGCTTGGGGAATTTGAAAAGTCTCAATGCACTTGATTTGTCAGATAACAAACTCAGTGGGTCAATTCCTGAGGAAATTTCAATGTTGCAGGAACTAACAATGTTGAGCTTGATGAACAACAAGTTAACGGGAGTGATACCACAAGGAATCGGAGATCTTCCAAAACTCTATACTTTGCTTCTGTGGAACAATTCGCTTTCTGGAATTCTCCCACAAACCCTTGGTTCCAATGGATTACTCCAGAAACTCGATGTTTCCACGAATTCACTCACAGGTGTCATTCCATCAAGTGTTTGCAATGGAAGCAAGCTTATCAAGCTCATTCTCTTTGATAACGAATTTGAAGGAGCTTTTCCAGAATCACTCACTAATTGCACTTCACTGGTAAGGCTTCGAATCCAAAATAATCGTCTCAATGGATCAATCCCCGGTGGTTTTGGCCTTCTTCCGAATCTTGCCTTCGCCGATATGAGTAACAACAACTTCACGGGACGAATTCCAGAAGATTTCAGTGATGCTCCGACATTGCAACACTTGAATCTCTCTGGGAATTCATTCGAAAATCCACTACCAAGCAATATTTGGAATGCTAGGAATTTACTGGTTTTCTCGGCGATTTCATCGAAAATTAACAGTCAGATTCCAGATTTCGTAGGGTGCAAGAACATTTACAGGATCGAATTGCAGGGGAATTTAATCAATGGTAGCATCCCTTGGACAATTGAGAACTGCGAGAGGCTTATTGCGTTGAATCTGAGTCGTAATTCGCTTTCTGGTATCATCCCCTCGGAAATCTCCGTTTTACCCTCAATCACTGATATTGACTTATCGCACAATTTTCTCTCCGGGACCATACCCTCCGGTTTCAATAACTGCACCACACTCGAGAACTTCAACGTCTCCTTCAATTCCCTCACCGGACAAATTCCTTCCGCCGGTTCAATCTTCCCGAACTTAAATCCGTCCTCCTTCTCCGGCAACGATGGCCTCTGCGGCGGCGTTATCGCAAAACCCTGCGCTATGGACACTACCCTCTCCCCTGCAACGGACGAACAACATTATCGTCCCAAGAGAACTACCGGTGCAGTGATGTGGATTGTCGCAGCGGCGGTGGCGGTCGGATTGTTCGCTCTAGTCGCCGGAACCCGATGCTTCCGGTCTCAGCACAGCCGTGCGTTCATGAACAACCGCCAGATCGGGCCGTGGAAATTAACCGCGTTCCAACGGTTGAATTTTACAGCAGAGGACGTGGTAGAGTGCATGACAGTCTCGAACAAGATTATAGGGATGGGGTCCACTGGAACAGTATTCAAAGTGGAGATGCCAGGTGGCGAGATCGTAGCCGTTAAAAAGCTATGGGGCACGCAAAAGGCGACCTCTAACAGCATCCGACGGCGGAAAGGGGTGCTAGCTGAAGTGGATGTATTGGGGAGCGTGAGGCACAGGAACATAGTGAGATTGTTAGGGTGTTGCTGCAACAGGGAGAGCACCATGCTGCTCTATGAGTACATGCCCAATGGGAATTTAGAAGACTTGTTACATGGCAAAAATGTGGTTGGAGATTGGTTAACTAGGTACAACATAGCATTAGGGGTGGCACAGGGGATTTGTTATCTTCATCATGATTGTGATCCAGTGATAGTTCATCGGGATCTCAAACCAAGTAATATTTTATTGGATGCTAAGATGGAAGCCAGAGTGGCAGATTTTGGAGTGGCCAAGTTGATTCGGAGTGATGAATCCATGTCTGTAATTGCGGGATCATATGGCTACATTGCTCCTGAATATGCATACACTCTACAAGTTGATGAGAAGAGTGACATTTATAGCTATGGAGTGGTGCTGATGGAGATTTTATGTGGAAGAAGATCGGTGGAAGCGGAGTTTGGCGATGGTAATAGTATTGTGGACTGGGTTAAGTCAAAGATCAAGACTAAAAATGGGGTTGATTACATATTAGATAAGAATGTTGGAGCCGGTTGTGCTCCGGTGAGGGATGAGATGATGCAGCTGCTGAGGATCGCGTTGCTTTGTACTAGCCGGAATCCGGCAGATCGGCCTTCCATGAGAGACGTTGTGATGATGCTTCAAGAGGCCAAGCCAAAGAGGAAGATGTTTGATAATCTTGTGTTAGGACAATGTGGTGATAAAGATATTAGTAGTGGTGGGGAGGATGATGATATTGTTTTGCCTCAAAAGGCAAAAGTGGAAATTTAA 3348 0.4456 MVVRREGIVILCFTHSCPPTKNTLKQTRHHETPSATSSTLKKHFPSSSSSSSSSSSIQSLLSPFKSTSFILILILTPCSSSTPPAMKIPSLFPLTFFFFFCQIQLLVFSATPSVIFSLLSLKASLIDPHNTLHDWNYSSSSSSNDSSPDPPHVWCSWSGITCLARTSQIIAIDLSQRNLSGSISPQIRFLTSLNHLNLSWNDFTGIFPPVIFDLSELRTLDINHNYFNSTFPPGISRLKFLRVFNAYSNNFIGPLPQEFMRLRFLEKLNLGGSYFNGTIPSGYGNLLRLKFLYLAGNLLEGPIPFQLGFLSELERLEIGYNQFSGGLPGEFALLSSLKYLDIASSNLSGSLIHDLGNMTMLETLLLYKNQLVGEIPSSLGNLKSLNALDLSDNKLSGSIPEEISMLQELTMLSLMNNKLTGVIPQGIGDLPKLYTLLLWNNSLSGILPQTLGSNGLLQKLDVSTNSLTGVIPSSVCNGSKLIKLILFDNEFEGAFPESLTNCTSLVRLRIQNNRLNGSIPGGFGLLPNLAFADMSNNNFTGRIPEDFSDAPTLQHLNLSGNSFENPLPSNIWNARNLLVFSAISSKINSQIPDFVGCKNIYRIELQGNLINGSIPWTIENCERLIALNLSRNSLSGIIPSEISVLPSITDIDLSHNFLSGTIPSGFNNCTTLENFNVSFNSLTGQIPSAGSIFPNLNPSSFSGNDGLCGGVIAKPCAMDTTLSPATDEQHYRPKRTTGAVMWIVAAAVAVGLFALVAGTRCFRSQHSRAFMNNRQIGPWKLTAFQRLNFTAEDVVECMTVSNKIIGMGSTGTVFKVEMPGGEIVAVKKLWGTQKATSNSIRRRKGVLAEVDVLGSVRHRNIVRLLGCCCNRESTMLLYEYMPNGNLEDLLHGKNVVGDWLTRYNIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDAKMEARVADFGVAKLIRSDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILCGRRSVEAEFGDGNSIVDWVKSKIKTKNGVDYILDKNVGAGCAPVRDEMMQLLRIALLCTSRNPADRPSMRDVVMMLQEAKPKRKMFDNLVLGQCGDKDISSGGEDDDIVLPQKAKVEI 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1586 1115 SUPERFAMILY L domain-like 153 472 - -
Acco08g1586 1115 MobiDBLite consensus disorder prediction 23 55 - -
Acco08g1586 1115 Gene3D Ribonuclease Inhibitor 116 404 IPR032675 -
Acco08g1586 1115 Gene3D Phosphorylase Kinase; domain 1 766 880 - -
Acco08g1586 1115 Gene3D Ribonuclease Inhibitor 405 722 IPR032675 -
Acco08g1586 1115 SMART serkin_6 799 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1586 1115 PANTHER RECEPTOR-LIKE PROTEIN 55 465 1075 - -
Acco08g1586 1115 Pfam Leucine rich repeat 361 419 IPR001611 GO:0005515
Acco08g1586 1115 Pfam Leucine rich repeat 504 562 IPR001611 GO:0005515
Acco08g1586 1115 Pfam Leucine rich repeat 599 656 IPR001611 GO:0005515
Acco08g1586 1115 Gene3D Transferase(Phosphotransferase) domain 1 881 1089 - -
Acco08g1586 1115 Pfam Leucine rich repeat N-terminal domain 117 162 IPR013210 -
Acco08g1586 1115 Pfam Protein kinase domain 802 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1586 1115 SMART LRR_typ_2 382 406 IPR003591 -
Acco08g1586 1115 SMART LRR_typ_2 190 209 IPR003591 -
Acco08g1586 1115 SMART LRR_typ_2 645 668 IPR003591 -
Acco08g1586 1115 SMART LRR_typ_2 310 333 IPR003591 -
Acco08g1586 1115 SMART LRR_typ_2 214 238 IPR003591 -
Acco08g1586 1115 SMART LRR_typ_2 430 453 IPR003591 -
Acco08g1586 1115 FunFam LRR receptor-like serine/threonine-protein kinase EFR 428 721 - -
Acco08g1586 1115 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 160 354 - -
Acco08g1586 1115 ProSitePatterns Serine/Threonine protein kinases active-site signature. 924 936 IPR008271 GO:0004672|GO:0006468
Acco08g1586 1115 ProSiteProfiles Protein kinase domain profile. 799 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1586 1115 FunFam LRR receptor-like serine/threonine-protein kinase 356 427 - -
Acco08g1586 1115 SUPERFAMILY Protein kinase-like (PK-like) 802 1073 IPR011009 -
Acco08g1586 1115 FunFam leucine-rich repeat receptor-like protein kinase TDR 881 1085 - -
Acco08g1586 1115 ProSitePatterns Protein kinases ATP-binding region signature. 805 828 IPR017441 GO:0005524
Acco08g1586 1115 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 767 880 - -
Acco08g1586 1115 ProSiteProfiles Leucine-rich repeat profile. 384 406 IPR001611 GO:0005515
Acco08g1586 1115 SUPERFAMILY RNI-like 375 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1586 Acco-ChrAcco08 21417036 21421846 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1586 86 1081 Receptor kinase-like Gene Family AT1G08590 42.172 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco08g1586 Pkinase 3e-48 CL0016