Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1582 ATGAAGCAAAACTCGACGATCAAGTTCTCTCCTTCTGCCAGCTCCCTTGACCGCAGTCAAATCGTCTATTGGACTGTCCTGTCTGTCAGTGGCACAATCGGTTTAGCGCGACGTCGATCGGCCATGGCCGATTCACGGGTTCCTTCTGGGCAAAGCCCCCATTTTCACCACCCAACCGCTGGCATCATCAAGAGGGTTCGATTGGAGAACTTCATGTGCCATAGCAACCTCGAGATTGAGCTCGGAGAGTGGGTTAATTTCATTACTGGTCAAAATGGAAGTGGTAAGAGCGCAATCCTAACTGCATTGTGTGTTGCATTTGGATGTCGAGCAAGAGGGACTCAGAGAGCGGCGACTCTGAAGGATTTTATTAAAACTGGCTGCAGTTCTGCTGTCATCCACGTGGACATAAAAAATGAAGGAGAGGATGCTTTTAAGCCCCAAATATATGGTGATATGATCACTGTAGAACGTAGGATATCTGAATCCACTAGCTCCATCGTGTTAAAAGACTACAGAGGAAAGAAGGTGGTCAGCCGGAAAGCAGAACTCCAGGAAATGGTTGAGCATTTTAATATTGATGTAGAGAATCCATGTGTTGTTATGAGTCAAGACAAAAGCAGGGAATTTTTGCATTCAGGGAATGACAAGGATAAATTCAAGTTCTTTTACAAGGCTACGCTTCTTCAGCAAGTTGATGATCTTTTGGAAAGCGTTTCTAAAGGACTAGAGCATTCATTTGGACTTCTTGGAGGATTAGAGGCTACAATAAGGCCTGTAGAGAAGGAGCTTAATGAGTTAAGGGTTAAAATTACAAACATGGAACAAGTTGAACAAATATCATTGCAGATTCAGCAGTTAAAGAAAAAACTTGCGTGGTCATGGGTTTTTGATGTGGACAAACAAATCCAGGGACAATGTTCAAAGATTGATAAATTAAAGGATCGAATACCTAAGTGCCAATCCAAAATTGATGACCAAATGAATATGGTTGAAGAATTGAGGGCATGTTTACATAAGAAGAAAGGTCATATCAAAAACTTATTTGAAAAGACATCTGAGGTGAAGCAGAAGAAGCAAAATTTACAACAATCTATATCCATGGCTGCAAAACAACTACTTGAAAAAGAACAAGAGTGCAAACGCATAACTGTCAGTATTGAGAAGATGGTAAGGCGTGTTAGGACTCTGGAAGAACAGGTGCAGGATATTTATGAGAAGCATGCACAAAGTACTCAGGCTGAAGAATCTGAGATAGAGGAGAAACTGAAAGTACTCCAAAATGATGTTGATGCTGCTGAATCAGCTTTGACAAGGTTGAGGGAAGAGGAAGCTATGCTAGCTGACAATGTACAAAGACAAAGTAATGAAATAAGAAAGATTGCGGATGAGATTGAAGGACATGATAGACGGTATCGTGAAATCAACGTTTCCATCCGTGAGCTTAAACAACACCAAACCAATAAGGTTACAGCTTTTGGAGGAGATAGAGTGATGAACTTACTGCGTATTATTGAGAGAAGCCATCGGAGGTTTAAGAGGCCACCCATTGGTCCAATTGGCGCCCATCTGAACCTGGTTAATGGCGATAGGTGGGGTGTTGCTATTGAGCATGCAATGGGGAAGATGCTGAATGCTTTTATAGTGACTGATCACAAGGATTCTCTTCTGTTGAGAGAATGTGCGAAGGAAGCAAACTACGGTTACCTCCAAATTTTCATTTATGATTTTTCAAGACCACGATTGTCTTTACCAGCACACATGCTTCCCCAGACAACACATCCTTCGATTCTTTCTGTTTTATATTCAGCAAATGACACTGTGATTAATGTCTTAGTGGATCTGGGGAGCATTGAGAGACAAATTCTTGTTAGGGATTATGATACTGGTAAAATGGTTGCTTTTGACGAAAGGATTTCAAATCTGAAGGAGGTCTTCACCTCAGATGGATATAAAATGTTTTCTCGGGGCTCAGTGCAGACAGTTCTTCCCCCAAATAAGAGACAGAGAACTAGCCGACTATGTAGTTCTTTTGATAATCAAATTAATGTTCTTGAAGCTGATGCTTCCCACGAACAAGAAGCAGCTAATCGCTTAAAGAGAAGTAAAAGGGAGGCTGAAGAAAAGCTTGAGGATCTTAATGGGAGGTTAAGACATGTGAAGAGGGTATGTTCAAATGCAGAGAAGGATTTGTCTTCTAAGAAATTAGCACTCGAAGATGAGAGGAACCAGTATGCGATGGCAAATCGTTCATCACCTGCATCATCTGTAGATGAGATTCAACAAGAAATATCTGAAGCCCAACACGAAATAGAAAGGAAGACAGACTTGTTGAAAGAAAGTCAGAACAGGATGAATGAAGCAGCAGCAAAGACAGATCATCTTAAAATATCATTTGAAGAACTATGTGCATCAACACAAGAGGAGATTAGTGCCCTTGAGAAAGCAGAGAATGAATTAATGCAGATTGAACGGGACATACGTTTAGCAGAAGAGGAGAGGGCTCATTATGATGGGATAATGCAACGCAAGGTACTGCCAGATATCAAGGAGGCAGAGGCACACTATCTGGAGCTCAAGCAGCAGCGAGAGGAATACAGCAGAAAGGCTTCTATAATTTGTTGTGAGGATGAACTTCAGTCCTTAGGAGATTGCAATGGAAGCACCCCAGAGCAACTCAGCGCACAGATAGAAAGACTATCTCAGAGACTAAAGCGTGAGAGTCAAAGATACACCGAATCACTAGATGATCTTAGGATGCTGTGTGAGAAAAAAGAACGCAAGATTATGAGAAAGCAGCAAGCTTACAAAGCCTATCGAACAAAGTTAGATGCTTGTCAGAGAGCTTTAGAATTACGGAGGAACAAGTTCCGCAGAAATGCAACTTATTTGAGGCGTTTGTTGTCTTGGAAATTTAATGCCCATTTGGGAAGAAAAGGATTCAGTGGACTTATCACAGTCAATTATGAAGAAAAAACCCTTTCAATCAAGGTGCAAATGCCTCAAGATGCATCAGGATGTGCTGTGCGTGACACTCGGGGCCTTTCAGGTGGTGAGCGTTCGTTTTCAACATTATGCTTTACACTAGCCCTTCATGATATGACAGAATCGCCTTTCCGCGCAATGGATGAATTTGATGTTTTTATGGATGCTGTCAGTCGAAAGATCAGCTTGGACACTCTCGTGGACTTTGCCGTGGAACAAGGATCCCAGTGGATATTTATTACCCCACATGATATCAGTGTGGTTAAGCAGGGAAACAGGATAAAGAAGCAGCAAATAGCAGCTCCCCGTTCTTGA 3300 0.4185 MKQNSTIKFSPSASSLDRSQIVYWTVLSVSGTIGLARRRSAMADSRVPSGQSPHFHHPTAGIIKRVRLENFMCHSNLEIELGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATLKDFIKTGCSSAVIHVDIKNEGEDAFKPQIYGDMITVERRISESTSSIVLKDYRGKKVVSRKAELQEMVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFYKATLLQQVDDLLESVSKGLEHSFGLLGGLEATIRPVEKELNELRVKITNMEQVEQISLQIQQLKKKLAWSWVFDVDKQIQGQCSKIDKLKDRIPKCQSKIDDQMNMVEELRACLHKKKGHIKNLFEKTSEVKQKKQNLQQSISMAAKQLLEKEQECKRITVSIEKMVRRVRTLEEQVQDIYEKHAQSTQAEESEIEEKLKVLQNDVDAAESALTRLREEEAMLADNVQRQSNEIRKIADEIEGHDRRYREINVSIRELKQHQTNKVTAFGGDRVMNLLRIIERSHRRFKRPPIGPIGAHLNLVNGDRWGVAIEHAMGKMLNAFIVTDHKDSLLLRECAKEANYGYLQIFIYDFSRPRLSLPAHMLPQTTHPSILSVLYSANDTVINVLVDLGSIERQILVRDYDTGKMVAFDERISNLKEVFTSDGYKMFSRGSVQTVLPPNKRQRTSRLCSSFDNQINVLEADASHEQEAANRLKRSKREAEEKLEDLNGRLRHVKRVCSNAEKDLSSKKLALEDERNQYAMANRSSPASSVDEIQQEISEAQHEIERKTDLLKESQNRMNEAAAKTDHLKISFEELCASTQEEISALEKAENELMQIERDIRLAEEERAHYDGIMQRKVLPDIKEAEAHYLELKQQREEYSRKASIICCEDELQSLGDCNGSTPEQLSAQIERLSQRLKRESQRYTESLDDLRMLCEKKERKIMRKQQAYKAYRTKLDACQRALELRRNKFRRNATYLRRLLSWKFNAHLGRKGFSGLITVNYEEKTLSIKVQMPQDASGCAVRDTRGLSGGERSFSTLCFTLALHDMTESPFRAMDEFDVFMDAVSRKISLDTLVDFAVEQGSQWIFITPHDISVVKQGNRIKKQQIAAPRS 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1582 1099 Coils Coil 849 869 - -
Acco08g1582 1099 SUPERFAMILY Methyl-accepting chemotaxis protein (MCP) signaling domain 318 486 - -
Acco08g1582 1099 Coils Coil 387 407 - -
Acco08g1582 1099 Pfam RecF/RecN/SMC N terminal domain 63 1078 IPR003395 -
Acco08g1582 1099 Gene3D - 858 1094 IPR027417 -
Acco08g1582 1099 Gene3D - 63 314 IPR027417 -
Acco08g1582 1099 Coils Coil 345 379 - -
Acco08g1582 1099 Coils Coil 409 471 - -
Acco08g1582 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 697 1089 IPR027417 -
Acco08g1582 1099 Coils Coil 682 744 - -
Acco08g1582 1099 Coils Coil 806 833 - -
Acco08g1582 1099 SUPERFAMILY Smc hinge domain 472 652 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Acco08g1582 1099 Coils Coil 897 942 - -
Acco08g1582 1099 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 57 1098 - -
Acco08g1582 1099 Coils Coil 757 791 - -
Acco08g1582 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 1089 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1582 Acco-ChrAcco08 21324785 21353594 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1582 60 1099 Structural Maintenance of Chromosomes family AT5G61460 60.865 0.0 1253