Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1581 ATGTCGTTTCACGTGGAGAACGAGGACCAGAACAAGAACCCTAGCCCTAGCTCTAGTCCTCAATTGAGGAAGAAGAGACCATCTAGCTGGTCCAACGTCTGGCTCAAGAACACCAAGCCTCTCAAGCATATGGTGGTCGCCATGCAACTCCAGTCCCTATCTTCTCCCGACGACCCCAAATCCAAAACCCTAACTCCCAATATTTTCCCAATTGACTTAACCCTTCTTTTGTCCGACGAGATTCTTCTCAGAATCTTCGCTAAGCTCCCTGATTCGCAGAGGAAGTGCATTTCTCTTGTCTGCAAACGGTGGTTTAATCTGCAGGGGCGGCTTGTACGGACACTCGAAGTGCTTGACTGGAACTTCGTTTTATCTGGTAGTTTGATTCATAGATTCCCCAATTTAAACCATGTAGATTTGATCCCTGGGTCGTTCATTTCGCCGCGGAATTCGGGTATTTTTCTGAGTCACCGACTTGTTTCAATGCATATTGACTGTGGATTTTATCCCAATTGGTGTTTTGGGGAGGAGAAAAATCTGCTTCCTGTTGATGTTATCGATGCTGGTCTGAAAGTTCTTGCTAGTGGGTGTCCCAATTTGCGTAAATTGCATATTATTGGTGCTAGTGAAGTGGGTTTATTGAGTGTGGCTGAGGAGTGTCTGACGTTGCAAGAGTTGGAATTGCAGAAATGCGATGACAATGTGCTGCGAGGGATTGCGGCTTGTCAGAATCTGCAGATCTTGAAATTGATTGCAAATGTTGATAGTTTCTACAGCTCAGTGGTCTCCGATATTGGATTGACTATTCTGGCTCAAGGTTGCAAGAGACTTGTCAAGCTTGAGCTTAGTGGTTGTGAAGGTAGCTTTGATGGGATCAAAGCAATAGGAACATGTTGTCAAATGTTGGAGGAATTGACTTTATCAGATCATAGAATGGATGATGGTTGGCTGGCAGCACTTTCGTTTTGTGAGAACTTAAAGACTTTGAGGATCCAATCATGTAAATGGATCGATCTACATCCTGGACCTGAGGAGCATTTGGGTTCATGCTTGGCACTTGAACGGCTGCATTTACGAAAGTGCCAGTTACGGGACAAAAATGGCATTGGAGCTATATTTGGAGTATGCAGGGCTGCAAGAGAGATTATCATCCAGGATTGCTGGGGATTGGATGATAGTATGTTCAGTTTTGCAAGCATCTGCAGGCAGGTGAAGCTTTTAAGCTTAGAAGGGTGTTCATTGCTAACAACAGAAGGTTTAGAGTCTGTAATTCAATCCTGGAAGGAGCTTCAGAGCCTTAGAGTAGTTTCCTGCAAGAACATAAAGGATAGTGAAATCTCACCCTCACTAGCAACTGTATTCACCACTCTTAAAGAATTAAGATGGAGGCCAGATACCAAGTCTCTTCTTCCGTCAAGTCTAATGGAGGTAAGCATGGGAAAGAGGGGAGGTAAATTTTTCAGAAGAACTTGA 1473 0.442 MSFHVENEDQNKNPSPSSSPQLRKKRPSSWSNVWLKNTKPLKHMVVAMQLQSLSSPDDPKSKTLTPNIFPIDLTLLLSDEILLRIFAKLPDSQRKCISLVCKRWFNLQGRLVRTLEVLDWNFVLSGSLIHRFPNLNHVDLIPGSFISPRNSGIFLSHRLVSMHIDCGFYPNWCFGEEKNLLPVDVIDAGLKVLASGCPNLRKLHIIGASEVGLLSVAEECLTLQELELQKCDDNVLRGIAACQNLQILKLIANVDSFYSSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGTCCQMLEELTLSDHRMDDGWLAALSFCENLKTLRIQSCKWIDLHPGPEEHLGSCLALERLHLRKCQLRDKNGIGAIFGVCRAAREIIIQDCWGLDDSMFSFASICRQVKLLSLEGCSLLTTEGLESVIQSWKELQSLRVVSCKNIKDSEISPSLATVFTTLKELRWRPDTKSLLPSSLMEVSMGKRGGKFFRRT 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1581 490 SUPERFAMILY RNI-like 120 253 - -
Acco08g1581 490 Gene3D - 74 110 - -
Acco08g1581 490 Pfam F-box-like 79 106 IPR001810 GO:0005515
Acco08g1581 490 PANTHER UNCHARACTERIZED 76 446 - -
Acco08g1581 490 SUPERFAMILY RNI-like 259 461 - -
Acco08g1581 490 FunFam F-box protein 339 473 - -
Acco08g1581 490 SMART LRR_CC_2 350 375 IPR006553 -
Acco08g1581 490 SMART LRR_CC_2 197 222 IPR006553 -
Acco08g1581 490 SMART LRR_CC_2 274 298 IPR006553 -
Acco08g1581 490 SMART LRR_CC_2 401 426 IPR006553 -
Acco08g1581 490 MobiDBLite consensus disorder prediction 1 29 - -
Acco08g1581 490 CDD F-box_AtTIR1-like 76 110 - -
Acco08g1581 490 Gene3D Ribonuclease Inhibitor 232 468 IPR032675 -
Acco08g1581 490 FunFam F-box protein At5g51380 70 338 - -
Acco08g1581 490 SUPERFAMILY F-box domain 70 124 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1581 Acco-ChrAcco08 21303270 21306199 Wgd