Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1565 ATGATGGATCATAATACAATTTCTCTCTCCTTTGCAATTCATATTGCTTGCTTGGTTTTTTGGTCACTATACCATTTCCAGTTCACTTCAGGACTTTCAGAAACTGAAGCACTACTCAGATGGAAGCAAAGTCTCCCATATCAACCAATTCTGGATTCATGGGTCGCTCCTCCACAAGCGAATTCCAGTTTGGCCCAATCCCCATGTTTATGGCGTGGAATAAAGTGTGATTCTTCAGGAAGTGTGGTTGAACTCAACTTGAATAACACTGGTCTCAAAGGTACCCTTAAAAACTTGAATTTCTCATCTTTCCCAAATCTTGTTCTTCTTAATCTCAAATTTAATCAGCTCAATGGTCCCATACCAGAATCAATTGGCTTGCTCTCAAAACTACAATTCCTTGACCTTAATCGTAATTATCTCAATGGCACCATACCTCTTTCTCTTTCTAATCTTACACAACTTTATGAGCTTGACCTTTCACAGAATCAAATAACTGGAATATTAGACCCTCGTCTATTCCCTGATGGATCTGATGAACCCAAAACAGGCTTGATTGGGATAAAATATCTTGTGCTTCAAGGCTTGCTCCTTGGAGGAAAAATTCCAACTGAAATAGGGAATTTGAAACAGTTGACTATTCTAGCTCTATATCAAAATAGCTTTTACGGTCCTATACCATTGTCTTTAGGGAATTGTACACATCTAAACATTCTCTCTTTGGCTGCAAACAGCTTCTCAGGTACAATTCCCCCTATTCTTGGTACATTACCAAATCTAACTGATGTTCGCTTGTTTATCAACAATTTCTCTGGTCCTTTACCAGAATGCTACAACAGGCTTCAGGGTAAGCTCTCTGAAAATTGGGGTGCCTGCAAGAGCTTGCAAAATCTTAATTTGGCTGGAAATTCAATAGATGGTATTTTACCTGGTGAGATCTTTCAGTTGAAGCAACTACAGAAGGTTGACTTGTCTTCAAATTTAATATCTGGTGAGATTCCTCCTCAAATTGGGATTACCTCTAGCTTGTACCATCTACATCTGGGTGGCAACAAGCTTTCAGGTTTGATCCCAAAAGACATTGGGAAGCTTTCTAGTTTGCAGTCTTTAGATATGTCAATAAATAGCTTAAGGGGACCCATCCCTTATCAAATAGGTGATTGCTATAACTTGCTGAATTTAAATCTTAGCAACAACTACTTTACTGGCAAAGTCCCATACCAAATAGGAAATCTTGTTTCTTTACAAGATTTTCTGGACTTGAGTTACAATTCACTTTCTGGAGAAATCCCCGTTGATTTCAGTAAACTCAACAAGTTGATAAGCTTGAACTTGTCTCATAATAATTTGTCAGGTCCTATCCCTAATTTCTTAGCAAGAATGTTAAGCTTGTCAAGCGTCAATCTATCCCATAACAATTTGGAAGGTCCTGTACCAGATAGTGGAGTTTTTAATTCTTCTAATCCAGTGGATCTAAGTAACAATAAAAATTTATGTGGGAGGATCCAAGGTTTAAAACCTTGCAACATTTCAACTATAAAGCCACATGTTGGAACTAACAAAAAGAAAATGGTGATAGCTATTACTTCTACTTTGGCTGTGGCATTGATTTTGTTGGGAGTGATTGGGATTTTTATTATTCTCTGTAAGAGAAACTCAAGAGCTGTAGAACATAACACCCGAGACAAGCTTGCGTACACAATGGCAGTGACAGAGAAACTTGATGTGTATAGCTTTGGTGTTTTGGCTATTGAGGTGCTTATGGGAGAGCATCCTGGTGATTTAATGTCCCGTAACCTAACATATGGGATTAATCAGATCAACTTCAAAGAGATTCTGGATCCACGTTTATCATCAACAAATCAGCAAAACTTGAAGAAATTGGCTCTGATTTGGCATATAGCTCTTTCATGCTTACAAGCAAACCCTCAGTCTCGTCCAACCATGAGAGGTGTCGCCCAGTTGATGGAAATGGAGAGTGCTCATAAAACATAA 1995 0.3835 MMDHNTISLSFAIHIACLVFWSLYHFQFTSGLSETEALLRWKQSLPYQPILDSWVAPPQANSSLAQSPCLWRGIKCDSSGSVVELNLNNTGLKGTLKNLNFSSFPNLVLLNLKFNQLNGPIPESIGLLSKLQFLDLNRNYLNGTIPLSLSNLTQLYELDLSQNQITGILDPRLFPDGSDEPKTGLIGIKYLVLQGLLLGGKIPTEIGNLKQLTILALYQNSFYGPIPLSLGNCTHLNILSLAANSFSGTIPPILGTLPNLTDVRLFINNFSGPLPECYNRLQGKLSENWGACKSLQNLNLAGNSIDGILPGEIFQLKQLQKVDLSSNLISGEIPPQIGITSSLYHLHLGGNKLSGLIPKDIGKLSSLQSLDMSINSLRGPIPYQIGDCYNLLNLNLSNNYFTGKVPYQIGNLVSLQDFLDLSYNSLSGEIPVDFSKLNKLISLNLSHNNLSGPIPNFLARMLSLSSVNLSHNNLEGPVPDSGVFNSSNPVDLSNNKNLCGRIQGLKPCNISTIKPHVGTNKKKMVIAITSTLAVALILLGVIGIFIILCKRNSRAVEHNTRDKLAYTMAVTEKLDVYSFGVLAIEVLMGEHPGDLMSRNLTYGINQINFKEILDPRLSSTNQQNLKKLALIWHIALSCLQANPQSRPTMRGVAQLMEMESAHKT 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1565 664 FunFam Leucine-rich repeat receptor-like protein kinase TDR 278 510 - -
Acco08g1565 664 Gene3D Transferase(Phosphotransferase) domain 1 551 658 - -
Acco08g1565 664 PANTHER LEUCINE RICH REPEAT KINASE 2 188 547 - -
Acco08g1565 664 Gene3D Ribonuclease Inhibitor 28 118 IPR032675 -
Acco08g1565 664 Gene3D Ribonuclease Inhibitor 278 515 IPR032675 -
Acco08g1565 664 FunFam Leucine-rich repeat receptor protein kinase EMS1 184 277 - -
Acco08g1565 664 FunFam Nuclear pore complex protein NUP107 32 174 - -
Acco08g1565 664 PRINTS Leucine-rich repeat signature 155 168 - -
Acco08g1565 664 PRINTS Leucine-rich repeat signature 437 450 - -
Acco08g1565 664 Pfam Leucine rich repeat N-terminal domain 33 77 IPR013210 -
Acco08g1565 664 Gene3D Ribonuclease Inhibitor 182 277 IPR032675 -
Acco08g1565 664 SMART LRR_typ_2 152 176 IPR003591 -
Acco08g1565 664 SMART LRR_typ_2 316 340 IPR003591 -
Acco08g1565 664 SMART LRR_typ_2 364 388 IPR003591 -
Acco08g1565 664 SMART LRR_typ_2 412 436 IPR003591 -
Acco08g1565 664 SMART LRR_typ_2 128 151 IPR003591 -
Acco08g1565 664 SMART LRR_typ_2 461 486 IPR003591 -
Acco08g1565 664 Pfam Protein tyrosine and serine/threonine kinase 568 654 IPR001245 GO:0004672|GO:0006468
Acco08g1565 664 SUPERFAMILY L domain-like 61 494 - -
Acco08g1565 664 Pfam Leucine Rich Repeat 439 458 IPR001611 GO:0005515
Acco08g1565 664 Gene3D Ribonuclease Inhibitor 119 176 IPR032675 -
Acco08g1565 664 SUPERFAMILY Protein kinase-like (PK-like) 568 657 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1565 Acco-ChrAcco08 20487356 20490328 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1565 84 570 Receptor kinase-like Gene Family AT4G08850 37.692 7.33e-82 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco08g1565 PK_Tyr_Ser-Thr 1.4e-05 CL0016