Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1500 ATGTCCTCCGCTGATCCTTACGAAATCATTGACGACGACGATGACGAAGCGTTCGATTGGGCTGCTGCTGCACGAGAAATAGATGTGGCTTGCAAAGTCACGAAGCCCTCCACTTCAATTGTTGGTGATACTTCTTCCAATTCGCGCCAAATGACTTTAGATAAATTTTTGGGTAAGAAGGAAACCCCAAGACCTCAACTTGAGGATCCCAAGATCAGCAAGAATGAGCAAGATTGCTTCGCAGGAGATGAAGAGGCGAGCTGCACTGAGGTTGACACTGAGGCAGTCAAAACTTGGATATACCCAGTGAATGTTCCTCTTCGTGACTACCAATTTGCTATAACAAAATCTGCTATATTTTCAAACACATTGGTGGCGTTGCCTACTGGACTTGGGAAAACTCTGATTGCTGCTGTGGTTATGTACAACTATTTCCGATGGTTTCCAAGAGGGAAAATTGTCTTCACTGCTCCATCTCGGCCACTTGTGATGCAACAGATAGAAGCATGCCATAATATTGTAGGAATACCTCAAGTAAGCACTGTTTCTAGTTGTCCTAGGGATTTGCTGAATTGTCAACTAAGTCCTGCTAAAAGAGCATGCTTTTGGAAAACCAAACGAGTTTTCTTTGTCACTCCACAAGTGTTGGAAAAAGATATTCATTCAGGTAAATGTTTGGTGAAATACTTGGTATGTTTGGTAATTGATGAAGCCCACAGAGCAATGGGAAATTACTCTTATTGTGAAGTAGTTCGTGAGTTAATGGCTGTGCCAGTGCAACTGCGAATATTGGCTTTAACTGCAACACCTGGAGTTCTAATTCTAAATGCTAAACGTTATAATTCAGCAAAGCAGCAAACAGTTCAGCAAGTCATTGATAATCTGCACATCTCCAAACTTGAATATCGCAATGAAAATGATCCTGATGTTATTTTATATGTTCACAAAAGGAAGATAGAGTTGATTCAGGTTGCAATGGGTCAAGATGCTGTAGAAATAAACCAGCAGCTTTTAGAAGTAATACGCCCAATTGTAGGTCGGCTCTCAGCAATGGGAGTTCTCAAGAATAGAGATTACCGCACTTTGAGCCCTTGTGAATTACTCGAAATACGGGATAAGTATCGTCAAGCACCTCCACATGATCTTTCCAATGTTAACAATGGAGATGTTGAGGGCTATTTTGGTGTTCTTATTAGTCTTTACTACATCCATAAGCTACTTTCAAGTCATGGAATCAGGCCAGCGCACGAGATGCTTGAAAGAAAATTGAATCAAGGGGATATAATGGATGCCCTAGCAAATATTGGGGAACCAATCAGAGCTACCCAGTTTATTGGTCAAAGTTCAGTTCTTGCATATACTTATGTTGTTTACTCACAGAAATTCCGTTCTGGAGCCTACAATGTCATTGTTGCTACATCAATTGGTGAAGAAGGTCTTGATATCATGGAAGTTGATCTTGTTGTAGCTTTTGATGCTAATGTCTCACCATTAAGAATGATTCAGCGCATGGGGAGAACTGGAAGAAAGCATGATGGACAAATTCCCCACGTCTTTAAACCAGAGGTTCAGTTTGTTGAGCTGTCAATTGAGAAATTTGTTTCCCGTGAGAAGAAAGTAAAAGATGACTCTATTCAGATACATTCATCCATTGGCAAACTTACAGTTGCTGAGAATAATATACTGGCGAAGTATTTTCCCACCACTGTTGAAAATACATGGAAGCCATCTCTTATTGCCTTTCCTTACATCCAGACATATCCTTCTAGAACACATAAAGATGGCCTGTGTATAGAAGTTAGTAACGCATTCGACTCAGACAAGATTGATGAAGTTAGATCAGGTAATATCAGTTTCAGTTTCCCAAGAATTTTAACTATGGATTCGCATACCATTGGAAGCAATGCGGTCTCTGTAAGTTGCCTGAAGCTGGATTCCTCTCATTCAGGGATTCAAACTGAAGACTTTGTTGATCTAACTGCACCTGATAATCTTGTGGGAGAACAGACATCGCCTAGTACAAGTTGCATAAAGAAGGATGATATACCGTCATCTTGTTTTATTGACTTAGATAAAGAGCAAACACACGAGTGTGAAGAGACAGTTCCTGACACTCCAATTGCTAAGACAGTCATGTCAAATGAAGGACATAGTGATGGTGGAACACCTGATTTTGCTCAGTTCAAGATATCTTTGCTGCCAGATGATGCATTCAATGACGGCATCAACGAGTCCCAGTGTAGTCCCCGTTTGATCAGTTTAATTAAAAGTGGTTTTGTTCCAGAGTCTCCCCTTGATGAGAGGGGTGATTTATCTCCAGGTCATATAAAATTAGCAGGGTTATCAAGAAGCCAGCTTGTCGTTCAGGACTGTGGACCACCTGTTCATCTCCAGATGGAACAACAAATTACCTCAAGTTTAGGGGCAAATGAAAATGTCATTATTGATGATGCCACAAATGTAAATAATGCATCTATTGATCCTGCTACTAATGAAACTCAAACCCTTTTATTCGAACGGAAGAGTTGTGCAATTAGAAGAGGTCAGGTCTTTAGTTCTCCTACAGTGGAGGAAGGCCAAAATGCTTTTGCAGATATTACAAATCGAGGCTTTAGTGAAGAATCACCTTTATGTTGTGGAGATGTTGCTGAAAGTGTCAAGCCAGCATGTAAATTTAAAAGGTTGCGTAAAGCTGATGGGGGTAGGCATCATAGGAAAGAGAAAAGAAGGAAGGATCGTGTTGTTTCGACAGAAAATCTTGGCAAAATTTCATCAACCCCTGATTCTACACACAAAAAACATGGCCAAGGTAGAAGGAAATCATTGCACAATGCCAGAGTCTTCATTGACGACGAGGCTGAGGTATCTTCAGAAGCTGATGTTTCTAACGATGAAGACGGTGAGGATGACAGTTCAATGGACAGTTTCATAGATGACAGGATGAACCCTACAGCAGCCACTCAGTCTAGAGCTAGTGGAATAGACATGATGGCAATATACAGGCGTTCTTTGCTCAGTCAAGTACCAGCTGAAGGAGGGACCAACAGTTCTGCTACATTTAGTCCAGACTATGTGTCATCCATGACTACAATTTGTGAAAATGGGGTTTCTTCTGGCAGCATACCAAGACATCTTCAGACACCTCAAATTGAGCCAATAAATCAGTCAGCTTCCAAGAATTTGCAATCAGTTGAAGTCAATCAAATCACCTCAGAAGCCATACCTTCAAGTAGTTTTTCCATTGAAACCACGACAGAGAGAAGTCGAAAAAGAAAATTGTCATTTCATCGAGTCGGATTTCCAAGTGCTAATCTTGAGCAGGAATTTGCACTTCAATCAAATGAAGAACCTATAGATGCTTATGCGACTAAGGATATTCTCTGTGATGATCACATTTTTGATGATATTGATCTTGATGAGTTGGAGGCTCAAGCAGCTTCTCTTCTTAAACAAAAATCAGATTTATCAGCACAGAAGCCAGATACACATACAATACCTCAATCTCACTTGCATGATTCTCACCTTATCAGCCCATCGTTCGACCTCGGGATATGA 3555 0.407 MSSADPYEIIDDDDDEAFDWAAAAREIDVACKVTKPSTSIVGDTSSNSRQMTLDKFLGKKETPRPQLEDPKISKNEQDCFAGDEEASCTEVDTEAVKTWIYPVNVPLRDYQFAITKSAIFSNTLVALPTGLGKTLIAAVVMYNYFRWFPRGKIVFTAPSRPLVMQQIEACHNIVGIPQVSTVSSCPRDLLNCQLSPAKRACFWKTKRVFFVTPQVLEKDIHSGKCLVKYLVCLVIDEAHRAMGNYSYCEVVRELMAVPVQLRILALTATPGVLILNAKRYNSAKQQTVQQVIDNLHISKLEYRNENDPDVILYVHKRKIELIQVAMGQDAVEINQQLLEVIRPIVGRLSAMGVLKNRDYRTLSPCELLEIRDKYRQAPPHDLSNVNNGDVEGYFGVLISLYYIHKLLSSHGIRPAHEMLERKLNQGDIMDALANIGEPIRATQFIGQSSVLAYTYVVYSQKFRSGAYNVIVATSIGEEGLDIMEVDLVVAFDANVSPLRMIQRMGRTGRKHDGQIPHVFKPEVQFVELSIEKFVSREKKVKDDSIQIHSSIGKLTVAENNILAKYFPTTVENTWKPSLIAFPYIQTYPSRTHKDGLCIEVSNAFDSDKIDEVRSGNISFSFPRILTMDSHTIGSNAVSVSCLKLDSSHSGIQTEDFVDLTAPDNLVGEQTSPSTSCIKKDDIPSSCFIDLDKEQTHECEETVPDTPIAKTVMSNEGHSDGGTPDFAQFKISLLPDDAFNDGINESQCSPRLISLIKSGFVPESPLDERGDLSPGHIKLAGLSRSQLVVQDCGPPVHLQMEQQITSSLGANENVIIDDATNVNNASIDPATNETQTLLFERKSCAIRRGQVFSSPTVEEGQNAFADITNRGFSEESPLCCGDVAESVKPACKFKRLRKADGGRHHRKEKRRKDRVVSTENLGKISSTPDSTHKKHGQGRRKSLHNARVFIDDEAEVSSEADVSNDEDGEDDSSMDSFIDDRMNPTAATQSRASGIDMMAIYRRSLLSQVPAEGGTNSSATFSPDYVSSMTTICENGVSSGSIPRHLQTPQIEPINQSASKNLQSVEVNQITSEAIPSSSFSIETTTERSRKRKLSFHRVGFPSANLEQEFALQSNEEPIDAYATKDILCDDHIFDDIDLDELEAQAASLLKQKSDLSAQKPDTHTIPQSHLHDSHLISPSFDLGI 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1500 1184 Gene3D - 458 515 IPR027417 -
Acco08g1500 1184 MobiDBLite consensus disorder prediction 954 973 - -
Acco08g1500 1184 CDD DEXDc_FANCM 105 303 IPR044749 GO:0005524
Acco08g1500 1184 MobiDBLite consensus disorder prediction 897 979 - -
Acco08g1500 1184 Pfam Type III restriction enzyme, res subunit 120 270 IPR006935 GO:0003677|GO:0005524|GO:0016787
Acco08g1500 1184 FunFam Fanconi anemia, complementation group M 102 314 - -
Acco08g1500 1184 Gene3D - 103 314 IPR027417 -
Acco08g1500 1184 Pfam Helicase conserved C-terminal domain 460 510 IPR001650 -
Acco08g1500 1184 SMART ultradead3 103 306 IPR014001 -
Acco08g1500 1184 Coils Coil 1138 1158 - -
Acco08g1500 1184 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 9 422 - -
Acco08g1500 1184 SMART helicmild6 417 511 IPR001650 -
Acco08g1500 1184 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 396 562 IPR001650 -
Acco08g1500 1184 CDD FANCM_ID 331 424 IPR039686 GO:0006281|GO:0043138
Acco08g1500 1184 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 114 288 IPR014001 -
Acco08g1500 1184 Gene3D hef helicase domain 328 427 - -
Acco08g1500 1184 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 122 515 IPR027417 -