Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1465 ATGGCTACATCTACATCAGTTCTTGATGGTCATTCTGAGGAAAGAATGGTGAGGAAGCTATCTGCATATCGTAATTACCCACCTGGTGTTGGACGGACTAGCAGATTTTTTCCTGTAAGAAGAGTCTTAGCCGTTAGAGACTATCCTCCATTTTGTGGGCCTAATGCTCTGAGTTTCAGTAAGGGAGATGTTTCCAAGGGCAATGGTACGGAAGAAAGGAAGAGAGAATTTGATTTTCTTGCACGGGGCGGTGGATCTAAAACTGTGATGACGGCTAGAAAATCTGTGAATCATTCCTGGATGATGCTTGTGAAAAAGAAAGAAGGCAATGCTTCTTCTGAAGGTATGGAAGGAAAATTTTCTGATATCCACAGATCATATTGTTATAATGTAAATGTTCCACTTCTATGTCGTGATAATTTGAGCAGAGGCAACAGTGAAACAGATGTCACCCGAAATACTGTAAGGGAGATAATGCGCTTGTTCCAAGCTGTTTCTAGAAAATTGTTGCAAGAAGAAGAAGCAAAGTTAAAAGGCAAAGCAAAAATTCGTAGGAGGATTGATTTAGAGGCAGCAAAGATACTTAAAAAGGAAGGCAAATATATTAATTCAGGCAAGTACATCTTTGGTTCTGTTCCTGGGGTTGAAATAGGTGATGAGTTTGACTATAGAATGGAGCTTCATTTAGTCGGTCTTCATCGCAATTTACAGGCTGGTATAGATTATGCAATGGGCAATGGTGAGCATCTTGCAACTAGTATTGTAGCATCAGGGGGATACAATGATGAGTTGGATAATTCAGGTGTTTTGATTTATTCAGGGCACGGGGGGAATGTGATGTCCAGAAAGAAAGCACCTGAAGACCAGAAGCTTGAGCGGGGTAATCTTGCTTTGAAGAACAGTAGCGAGAAAAAGAATCCTGTTAGAGTGATACGTGGTGCTTTCTTTGGAGGTGGAAATCGTAGGACATTTGTGTATGATGGATTGTATGAAGTTGAGGCATACTGGCAAGAAAGGGGGCCACATGGCAAGATGATTTTCAAGTTTCAGCTACGAAGAATCCCAAATCAACCAGAGCTTCCTTGGATTGAACTGAAGAATTCCAACATGTTCACATTAAGGAAGGGTTTGTGTGTTGCTGACATCTCAAATGGTAAAGAAGCATTGCCAATCCATGCTGTCAATAACATAGATAATGAAAAACCACCAATCTTTGAATATATCACTAGGATGATCTACCCTACTTGGTTGCAGCCACCACCTTCTAAGGGATGTACCTGTACGGGCAGATGCTCTGACTCTACAAGATGTTCTTGTGCTGTGAAAAATGGAGGACTCCCATTCAATCACACAGGGTGTATAGTAGAAGTAAAGCCCCTAGTCTATGAGTGTGGCCCTTCTTGCAAATGCCCTCCAGATTGCTATAACAGAGTCAGCCAAAGTGGCATAAAATTCCCACTCGAAATTTATAAAACTGACAAAAGGGGATGGGGTGTGAGATCTCTACGCTCTATCCCTTCTGGAAGTTTTGTATGTGAATACATAGGAGAGTTGCTTGAAGACAAGGAAGCTGAGAAGAGAACTGGTCATGATGAGTATCTATTTGATATTGGTGATAATTTGATCAACAATGCTGTAGATTCTGGTGGTGGCTTCACCATTGATGCAGCTCGCTTTGGTAATCTGGGTAGATTTTTCAACCATAGTTGCGCCCCTAATATGTATGCACAAAATGTTCTGTATGATCGTGGCGACCACAGCATTCCTCACATAATGCTCTTTGCTGCTGAAAACATTCCTCCATTAAAAGAGCTGACTTATGATTACAATTACTCAAAAGATAAAATCTTCGATTTGGATGGCAACATAAAAAAGAAAAATTGCTATTGCGGCTCTGCGGGGTGTAATGGAAGGATTGGATTGATTGAGAATGAGGATAGAAAAAAGATTCCATCATATCAAATGCAAAGGTTGTCGCTTTTGTTGGTTTTACTTCTAGATGCTTTGAAGATAAATATGACACACAAAGACGAAGAATCAGAACTCGAGCTGGAGATGAAACTTACAAGCCATGATAATGCAGATAGAAAGCATGCAGCAAAGACGGTGGAGAGGACCTCTGCTGCTATTGGTGATTGTGTTACTGCCCAATCAGCCTTTGTTGCAGAACTCGGTGCTGTAAGAAAAGCGATCCTATTGTGCATTGACCTTGACCTTGAGCATGTCCTCATTGAAACTGATAACGCAAACCTTGCCTCGTTGGCTTATATCTTATATAATGAAATATATTCAAGTTCAGAAATAAAAAGTAGAACTGTGGTAGGCATGGAATGGGTGGTGCCATCTGTGCAGTGGCTGCTCTTGACGACGTTAGGCTACATGGATGGTTTGCTTTTAGTTGATTTACAGTCAAGCTCTCCACTTTTGGTCTTTCATGGAATTGAGCCTATAATTTTGACTTACAAGAGAACTTTTATGAAACGGAATCCTATAGCTGCATCATTATCGGTAGGTCTTGAGGTTGTTGCTCTAAACAGGAAGGCATTAATGGATAAAATTCTTGGTAGGAGACGTACGTTCTCTGCAGTTCGTGATTATTCTCCTGGATGTGGCCCATTCGCTGCTACGCTTCAACAACAGCAGCATGAAGAAACTGAAACTTGTGATGACTCTGAAGAATTGGGATGTGAGACTATTGGTAAGAGACGCAAGTTCTACACTGTGGTCCGCGATTATCAGCAATTTGATGATCGTTTTGAATCCTTAGGCTCAAATGGGAAAGAAGTCGAGATATTGTGA 2799 0.4105 MATSTSVLDGHSEERMVRKLSAYRNYPPGVGRTSRFFPVRRVLAVRDYPPFCGPNALSFSKGDVSKGNGTEERKREFDFLARGGGSKTVMTARKSVNHSWMMLVKKKEGNASSEGMEGKFSDIHRSYCYNVNVPLLCRDNLSRGNSETDVTRNTVREIMRLFQAVSRKLLQEEEAKLKGKAKIRRRIDLEAAKILKKEGKYINSGKYIFGSVPGVEIGDEFDYRMELHLVGLHRNLQAGIDYAMGNGEHLATSIVASGGYNDELDNSGVLIYSGHGGNVMSRKKAPEDQKLERGNLALKNSSEKKNPVRVIRGAFFGGGNRRTFVYDGLYEVEAYWQERGPHGKMIFKFQLRRIPNQPELPWIELKNSNMFTLRKGLCVADISNGKEALPIHAVNNIDNEKPPIFEYITRMIYPTWLQPPPSKGCTCTGRCSDSTRCSCAVKNGGLPFNHTGCIVEVKPLVYECGPSCKCPPDCYNRVSQSGIKFPLEIYKTDKRGWGVRSLRSIPSGSFVCEYIGELLEDKEAEKRTGHDEYLFDIGDNLINNAVDSGGGFTIDAARFGNLGRFFNHSCAPNMYAQNVLYDRGDHSIPHIMLFAAENIPPLKELTYDYNYSKDKIFDLDGNIKKKNCYCGSAGCNGRIGLIENEDRKKIPSYQMQRLSLLLVLLLDALKINMTHKDEESELELEMKLTSHDNADRKHAAKTVERTSAAIGDCVTAQSAFVAELGAVRKAILLCIDLDLEHVLIETDNANLASLAYILYNEIYSSSEIKSRTVVGMEWVVPSVQWLLLTTLGYMDGLLLVDLQSSSPLLVFHGIEPIILTYKRTFMKRNPIAASLSVGLEVVALNRKALMDKILGRRRTFSAVRDYSPGCGPFAATLQQQQHEETETCDDSEELGCETIGKRRKFYTVVRDYQQFDDRFESLGSNGKEVEIL 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1465 932 Gene3D SET domain 373 639 IPR046341 -
Acco08g1465 932 Pfam SET domain 496 610 IPR001214 GO:0005515
Acco08g1465 932 Pfam Pre-SET motif 382 477 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco08g1465 932 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 108 633 - -
Acco08g1465 932 SUPERFAMILY PUA domain-like 191 366 IPR015947 -
Acco08g1465 932 Pfam SAD/SRA domain 209 357 IPR003105 -
Acco08g1465 932 ProSiteProfiles YDG domain profile. 210 353 IPR003105 -
Acco08g1465 932 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 59 653 IPR025794 GO:0016571
Acco08g1465 932 ProSiteProfiles Pre-SET domain profile. 423 482 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco08g1465 932 SMART G9a_1 205 357 IPR003105 -
Acco08g1465 932 SMART set_7 485 616 IPR001214 GO:0005515
Acco08g1465 932 SMART preset_2 379 469 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco08g1465 932 ProSiteProfiles SET domain profile. 485 610 IPR001214 GO:0005515
Acco08g1465 932 ProSiteProfiles Post-SET domain profile. 624 640 IPR003616 -
Acco08g1465 932 Gene3D - 192 372 IPR036987 -
Acco08g1465 932 SUPERFAMILY SET domain 368 617 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1465 Acco-ChrAcco08 17863422 17870681 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1465 152 640 Su(var)3-9 homologs AT5G04940 39.155 1.66e-105 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco08g1465 SAD_SRA 4.2e-49 CL0178