Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1463 ATGCCTACATCAGTTCTTGATGGTCAGTCTGGAGAAAAATTGCTTCGGAAGCCATTTGCCATTCGTGATTACCCGCCTGGGGTTGGACCAAATGCTGCAAGAATCCATGTTAAACCTAAAGAAGATATTGCTGAGGGTGGTGAGGCTAATCTTCAACACTCTGCCACTAGAAGATTTGTTTCTGCTATTAGAGACTATCCTCCTTTTTGTGGACGTAATTCTCAGGGACTGAGTAAGGCAGATGTCTCCAAGCTCATGCAGAGGCATTTGACTGGTGTTAGGGAAGAAAGGAAGAGAAAACTTGATTGCCTCACACAGGGTGATGGATCTAAAGCCGTGATGAGGACTAAAGACTCTCTGAATCATTCCAACATGAAGGTTTTAAAAAAGAAAGAAGGAAATGCTGCTTCTGGAGCTATGGGTAGACTTGTAGTCATAGGAAAAAATGGTCGTGATATCAATTATAGCAGAAAATTTTCTGATGGCCACAGATCATATTGTTCTAATGTAAATGTTCCACTTCTATGTCGTGATAATTTGAGTAGAGGCAACAGTGAAACAGATGTCACCCGAAATACTGTGAGGGACATAATGCGCTGGTTCCAAGCTGTTAGTAGAAAATTGTTGCAAGAAGAAGAAGCAAAGTTAAAGGGCAAAGAAAAAATTCGTAGGAGGATTGATTTAGAGGCAGCAAAGATACTTAAAAAGGAAGGCAAATATATTAATTCAGGCAAGTACATCTTTGGTTCTGTTCCTGGGGTTGAGATAGGTGATGAGTTTGACTATAGAATGGAGCTTCATTTAGTCGGTCTTCATCGCAATTTACAGGCTGGTATAGATTATGCAATGGGCAATGGTGAGCATCTTGCAACTAGTATTGTTGCATCAGGGGGATACAATGATGAGTTGGATAATTCAGGTGTTTTGATTTATTCAGGGCACGGGGGGAATGTGATGTCCAGAAAGAAAGCCCCTGAAGACCAGAAGCTTGAGCGGGGTAATCTTGCTTTGAAGAACAGTAGCGAGAAAAAGAATCCTGTTAGAATGATACGTGGGGCTTTCTTTGGGGGTGGAAGTCGTAGGACATTTGTGTATGATGGATTGTATGAAGTTGAGTCATACTGGCAAGAAAGGGGGCCACATGGCAAGATGGTTTTCAAGTTTCAGCTGCGAAGAATCCCAAATCAACCTGAGCTTCCTTGGATTGAACTGAATAATCCCAACACGTTCACATTAAGGAAGGGCTTGTGTGTTGCTGACATCTCACATGGTAAAGAGGCATTACCAATTCGTGCTGTGAATACCAAAGACCATCAAATACCACCATCGTTTGAATATATCACTAGGATGATCTACCCTGGTTGGTTGCAGCCAATATCTTCTAAGGGATGTAACTGTACAGACAGATGCTCTGACCCTACTAGATGTTCTTGTGCTGTTAGAAATGGAGGAATCCCATTCAATCACACAGGATGTATTGTAGAAGAAAAGTCTCTAGTCTATGAGTGTGGCCCTTCTTGCACATGCCCTCCAGATTGCTATAGCAGAGTTAGCCAACATGGCATAAAATTGCCACTTGAAATTTATAAAACTGAAAAAAGGGGATGGGGTGTGAGATCTCTATGCTCCATCCCTTCTGGAAGTTTTGTATGTGAATACATAGGAGAGTTGCTTGAAGAAAATGAAGCTGAGAAGAGAACTGGTCTTGATGAGTATCTATTTGACATAGGTAATAACTTGATCAATAATGGTATACTTTCTGATGGAGTCTCCAGGCCTGAAGTCTCTGAGGGTTGTGGTGGTTCCACCATTGATGCAGCTCAGTACGGTAATCTGGGCAGATTTTTCAACCATAGTTGTGCCCCTAATATGTATGCACAAAATGTTTTGTATGATCATGGCGACCGCAGGTTTCCTCACATAATGCTGTTTGCCGCTGAGAACATTCCTCCATTAAAAGAGCTGACTTATGATTACAATTACTCAAAAAATCAAATCCTCAATTCTGACGGCAGCATAAAGAAGAAGGATTGCTTTTGTGGCTCTGTGGGATGCACTGGAAGGATGTATTGA 2073 0.4168 MPTSVLDGQSGEKLLRKPFAIRDYPPGVGPNAARIHVKPKEDIAEGGEANLQHSATRRFVSAIRDYPPFCGRNSQGLSKADVSKLMQRHLTGVREERKRKLDCLTQGDGSKAVMRTKDSLNHSNMKVLKKKEGNAASGAMGRLVVIGKNGRDINYSRKFSDGHRSYCSNVNVPLLCRDNLSRGNSETDVTRNTVRDIMRWFQAVSRKLLQEEEAKLKGKEKIRRRIDLEAAKILKKEGKYINSGKYIFGSVPGVEIGDEFDYRMELHLVGLHRNLQAGIDYAMGNGEHLATSIVASGGYNDELDNSGVLIYSGHGGNVMSRKKAPEDQKLERGNLALKNSSEKKNPVRMIRGAFFGGGSRRTFVYDGLYEVESYWQERGPHGKMVFKFQLRRIPNQPELPWIELNNPNTFTLRKGLCVADISHGKEALPIRAVNTKDHQIPPSFEYITRMIYPGWLQPISSKGCNCTDRCSDPTRCSCAVRNGGIPFNHTGCIVEEKSLVYECGPSCTCPPDCYSRVSQHGIKLPLEIYKTEKRGWGVRSLCSIPSGSFVCEYIGELLEENEAEKRTGLDEYLFDIGNNLINNGILSDGVSRPEVSEGCGGSTIDAAQYGNLGRFFNHSCAPNMYAQNVLYDHGDRRFPHIMLFAAENIPPLKELTYDYNYSKNQILNSDGSIKKKDCFCGSVGCTGRMY 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1463 690 ProSiteProfiles SET domain profile. 524 660 IPR001214 GO:0005515
Acco08g1463 690 Pfam SET domain 535 660 IPR001214 GO:0005515
Acco08g1463 690 SMART G9a_1 244 396 IPR003105 -
Acco08g1463 690 SUPERFAMILY SET domain 408 667 IPR046341 -
Acco08g1463 690 SMART preset_2 418 508 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco08g1463 690 ProSiteProfiles YDG domain profile. 249 392 IPR003105 -
Acco08g1463 690 ProSiteProfiles Pre-SET domain profile. 462 521 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco08g1463 690 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 175 682 - -
Acco08g1463 690 SUPERFAMILY PUA domain-like 230 404 IPR015947 -
Acco08g1463 690 Pfam SAD/SRA domain 248 396 IPR003105 -
Acco08g1463 690 Pfam Pre-SET motif 421 516 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco08g1463 690 SMART PostSET_3 674 690 IPR003616 -
Acco08g1463 690 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 111 690 IPR025794 GO:0016571
Acco08g1463 690 Gene3D SET domain 412 690 IPR046341 -
Acco08g1463 690 ProSiteProfiles Post-SET domain profile. 674 690 IPR003616 -
Acco08g1463 690 Gene3D - 230 411 IPR036987 -
Acco08g1463 690 SMART set_7 524 666 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1463 Acco-ChrAcco08 17847085 17849157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1463 237 690 EF-hand Containing Proteins AT5G13960 38.855 1.01e-107 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco08g1463 SAD_SRA 1.2e-48 CL0178