Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1459 ATGGCTGCACCAAAATCAATTCTTGATGGTCATTCTGAAGAAAAAATGCATAGTAAGCCATCTGCAATTCTTGATTACCCACCTGGGTTTGGACCGAAATTAGCTAGTTCGAATGATTATTTTCAGAAGGCTGGGACCGGAAGGTTTCCTTCTGCAAGAAGAGTTTCAGCCGTTAGAGACTATCCTCCATTTTCTGGGCCTAATGCTCTGAGTCTGAGTAAGGGAGATGTTTCCAAGGGCATGCTCATGGACATACATTTGAGTGGTGGTACAGAAGAAAGGAAGAGAAAACTTGATTGCCTTGCACAGGGCAATGGGTCTAAAGCTGTGATGACAGCTGAAAAATCTGAGTCCTTCAAAGATGATGTTTGTGATAAGGAAGAAGGAAATGCTTCTTCTGGAGGTATAGATGGAAAATTTTCTGATGTCTACACATCATATGGTTATAGTGTAAATGTTCCTCTTCTACATCATTATAATTTGAGCAGTGGCAACAGTGACACAAATGTGACCCGAAATACTGTAAGGGAGATAATGCGCTGGTTCCAAGCTGTTTGTAGAAAATTGTTGCAAGAAAAAGAAGCAAAGTTAAAAGGCAAAGCAAAAATTGATAGGAGGATTGATTTAGAGGCAGCAAAGATCCTTAAAAGGGAAGGCAAATATGTTAATGCTGACAAGCTGATCTTTGGTTCTGTCCCTGGGGTTGAAATAGGTGATGAGTTTGACTATAGAGTGGAGCTTCATCTAGTCGGTCTTCATCGCAATTTACATGCTGGCATAGATTATGCAATGCACAATGGTGAACATCTTGTAACTAGTATTGTTGCATCTGGGGGATACAGTGATGAATTGGACAATTCAGGTGTTTTGATTTATACAGGGCACGGAGGGAATGTGATGTGCAGTAGGAAACAACCTGAAGACCAAAAGCTTGAGCGGGGTAATCTTGCTTTGAAGAACAGTAGCAAGAAAAAGAATCCTGTTAGAGTGATACGTGGTGCTTTCTTTGGAGGTGGAAGTCATAGGAGATCTGTGTATGATGGACTGTATGAAGTTGAGACATACTGGCAAGAAATGGGACCACGTGGCAAGATGATTTTCAAGTTTAAGCTTCGAAGAAACCCAAATCAACCAGAGCTTCCTTGGATTGAACTGGAGAATTCAAAAGAGTTCACGTTAAGGATGGGTTTATGTGTTGGTGACATCTCACATGGAAAAGAGGCTTTACCAATTCGTGCTGTGAATACAATAGATCATGAAAAACCACCGTCATTTGAATACATTACTAGAATGATCTATCCGGATTGGTTGCATCCAGCACCTGCTGAAGGATGTTACTGTATTGACAGATGCTCAGACCCTACAAGATGTTCTTGTGCTGTTAAAAATGGAGGAATCCCATTTAATCACACAGGGTGTATTGTAGAAGTAAAGCCTCTAGTCTATGAGTGTGGCCCTTCTTGCAAATGCCCTCCAGATTGCTATAACAGAGTCAGCCAACATGGCATAAAATTGCCACTTGAAATTTATAAAGCTGACAAAAGGGGATGGGGTGTGAGATCTCTACACTCCATCCCTTCTGGAAGTTTTGTATGTGAATACATAGGAGAGTTGCTTGAAGACAAGGAAGTTGAACAAAGAACTGGTCATGATGAGTATCTGTTTTCCATAGGCAATAACTTGATCAAGAATGGTATACTTTCTGATGGATTTTCCACGCTTGAAGTCTCTGAGGATGGTGGTGGCTTCACCATCGATGCAGCTCGGTATGGTAACGTGGGCAGATTTTTCAACCATAGTTGTGCCCCTAATATGTATGCACAGAATGTTCTGTATGATCATGGGGACCACAGGATTCCTCATATAATGTTGTTTGCTGCTGAGAACATTCCTCCATTAAAAGAGCTGACTTATGATTACAATTACTTGAAAGATCAAATCTTCGATTCTGATGGCTGCATAAAGAAGAAGGATTGA 1977 0.4092 MAAPKSILDGHSEEKMHSKPSAILDYPPGFGPKLASSNDYFQKAGTGRFPSARRVSAVRDYPPFSGPNALSLSKGDVSKGMLMDIHLSGGTEERKRKLDCLAQGNGSKAVMTAEKSESFKDDVCDKEEGNASSGGIDGKFSDVYTSYGYSVNVPLLHHYNLSSGNSDTNVTRNTVREIMRWFQAVCRKLLQEKEAKLKGKAKIDRRIDLEAAKILKREGKYVNADKLIFGSVPGVEIGDEFDYRVELHLVGLHRNLHAGIDYAMHNGEHLVTSIVASGGYSDELDNSGVLIYTGHGGNVMCSRKQPEDQKLERGNLALKNSSKKKNPVRVIRGAFFGGGSHRRSVYDGLYEVETYWQEMGPRGKMIFKFKLRRNPNQPELPWIELENSKEFTLRMGLCVGDISHGKEALPIRAVNTIDHEKPPSFEYITRMIYPDWLHPAPAEGCYCIDRCSDPTRCSCAVKNGGIPFNHTGCIVEVKPLVYECGPSCKCPPDCYNRVSQHGIKLPLEIYKADKRGWGVRSLHSIPSGSFVCEYIGELLEDKEVEQRTGHDEYLFSIGNNLIKNGILSDGFSTLEVSEDGGGFTIDAARYGNVGRFFNHSCAPNMYAQNVLYDHGDHRIPHIMLFAAENIPPLKELTYDYNYLKDQIFDSDGCIKKKD 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1459 658 Gene3D - 212 394 IPR036987 -
Acco08g1459 658 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 160 646 - -
Acco08g1459 658 SUPERFAMILY PUA domain-like 214 385 IPR015947 -
Acco08g1459 658 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 81 658 IPR025794 GO:0016571
Acco08g1459 658 Pfam SAD/SRA domain 229 377 IPR003105 -
Acco08g1459 658 Gene3D SET domain 395 657 IPR046341 -
Acco08g1459 658 ProSiteProfiles YDG domain profile. 230 373 IPR003105 -
Acco08g1459 658 SMART preset_2 399 489 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco08g1459 658 SMART G9a_1 225 377 IPR003105 -
Acco08g1459 658 Pfam SET domain 516 641 IPR001214 GO:0005515
Acco08g1459 658 ProSiteProfiles Pre-SET domain profile. 443 502 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Acco08g1459 658 SMART set_7 505 647 IPR001214 GO:0005515
Acco08g1459 658 ProSiteProfiles SET domain profile. 505 641 IPR001214 GO:0005515
Acco08g1459 658 MobiDBLite consensus disorder prediction 1 28 - -
Acco08g1459 658 SUPERFAMILY SET domain 391 642 IPR046341 -
Acco08g1459 658 Pfam Pre-SET motif 402 497 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1459 Acco-ChrAcco08 17767768 17769744 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1459 169 640 Su(var)3-9 homologs AT5G04940 40.530 5.99e-103 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Acco08g1459 SAD_SRA 1e-46 CL0178