Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1458 ATGTTTGTGCATAGAAACTCCATAGCTGTTTTGGTGATTCCCATTATTGCTGTTTTTGCATATTTCATTGGCGTCCATAAGACTAATCAAAATGAGCAGTCCGTTGTGGGTAATCTGTTGTCGTCGTGTCCTTTAAGTCGTGGTCATCGCAACGGCCGCCGCCACCACCACCACCACCATCATTCCCACCACAAGAAGCGACCTGATGACAGTGAGATTGTCAGCAACATATGCGATGACTTTCCACCGGGAATTCCACCGCCGAACACCAACACGACAACATATCTGTGTGTGGATCGACGAGGGTGCTGCAATTTCACCACTGTGCAAGCAGCTGTAAATGCTGTCCCTGATTTCAGCGATAAAAGAAACATTATATGGATTAACAATGGCCTTTATTATGAGAAAGTGATGGTGCCAAAAAGCAAACCAAACATCACATTTGAAGGACAGGGCTACACTTCAACGGCAATTGCATGGAACGACACTGCCAAGTCAGCAAACGGCACATTCTATAGTGGCTCCGTCCAAGTCTTCGCCTCCAACTTCATTGCCAAAAACATAAGCTTCATGAATGTAGCACCAATTCCAGGTCCAGGGGTGGAAGGAGCACAAGCAGTGGCAATAAGGGTAGGGAGTGATCAGGCTCAATTCTGGGGATGTGGGTTTTTTGGAGCACAAGATACTCTTCATGATGATAGGGGTCGCCATTACTTTAGGGATTGTTACATCCAAGGCTCCATTGATTTCATCTTTGGCAATGCAAGGTCTCTTTATGAGAATTGTCAACTAGTGTCAATGGCCAACCCAGTCCCACCGGGACAAAAGTTCATAAACGGCGCCGTTACTGCTCATGGGAGGTCATCAAACGACGAAAACACAGGCTTTGCTTTTGTCAACTGTAGCATAGGAGGGTACGGAAGAATATGGTTAGGTCGGGCATGGCGTCCTTATTCTCGTGTCGTTTTTGCCTTTACGACAATGTCTGATATTATTGCCCCTGAAGGTTGGAACGACTTCAATGACCCTTCAAGAGATCAGACAATATTCTATGGAGAATACAACTGCACAGGGCCAGGGGCTAATATGAATATGAGGGCACCATATGTACAGAGATTAAATGATACAATTGCTTCCAATTTCCTTAACATATCATTTATTGATGGAAACCAATGGTTGTTCCCTCCCAAATAA 1194 0.4506 MFVHRNSIAVLVIPIIAVFAYFIGVHKTNQNEQSVVGNLLSSCPLSRGHRNGRRHHHHHHHSHHKKRPDDSEIVSNICDDFPPGIPPPNTNTTTYLCVDRRGCCNFTTVQAAVNAVPDFSDKRNIIWINNGLYYEKVMVPKSKPNITFEGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNVAPIPGPGVEGAQAVAIRVGSDQAQFWGCGFFGAQDTLHDDRGRHYFRDCYIQGSIDFIFGNARSLYENCQLVSMANPVPPGQKFINGAVTAHGRSSNDENTGFAFVNCSIGGYGRIWLGRAWRPYSRVVFAFTTMSDIIAPEGWNDFNDPSRDQTIFYGEYNCTGPGANMNMRAPYVQRLNDTIASNFLNISFIDGNQWLFPPK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1458 397 SUPERFAMILY Pectin lyase-like 94 394 IPR011050 -
Acco08g1458 397 Gene3D - 89 395 IPR012334 -
Acco08g1458 397 FunFam Pectinesterase 90 397 - -
Acco08g1458 397 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 84 393 - -
Acco08g1458 397 MobiDBLite consensus disorder prediction 48 65 - -
Acco08g1458 397 MobiDBLite consensus disorder prediction 47 70 - -
Acco08g1458 397 Pfam Pectinesterase 98 390 IPR000070 GO:0030599|GO:0042545
Acco08g1458 397 ProSitePatterns Pectinesterase signature 2. 244 253 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1458 Acco-ChrAcco08 17756412 17760632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1458 61 393 Carbohydrate Esterase AT1G05310 71.772 0.0 523