Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1456 ATGGAAGAAGAAGGCAACACCAGCACACAAGGACGTGTCATGGATTCTTCGACTCCAGCTCCAGCTCCGGCTTACCGGGGAGTTCGAAAGCGAACATGGGGCAAATGGGTGTCGGAAATCCGTGAGCCTGGCAAGAAAACTCGGATATGGTTAGGAAGCTATGAGGCACCGGAAATGGCGGCTGCGGCGTATGACGTTGCGGCTTCATACTTCCGAGGACAGTCAGCAAAGCTTAACTTCCCAGAGTTCGGCGGAGTGTTTCCACGGCCGGCGAGTTCCCGAGCAGAGGACGTCCGGTTCGCAGCTCAACAAGCGGCACTGATGATGAAGAGACCATTGAGATGTCAATCAACGAGGGAGGCGGAAGAAGACGCCGTCACAGGTCCGGTGCCAACGACAACGACGAGAGTGGGGCTGTCAGCGAGCCAGATTGAGGCAATCAATGAGTGGCCATTGGATTCACCAAAGATGTGGATGCAAATGGCTGAAGCTCCCATAATGTCAGGATTTGATGAGTCCATGGCATTGTACAATAACAACGACGAGGATGATCAATTATTAGAATCAACAAGTTGGGAAGATATAGAGGATAGTTCTATATGGCATTTCTAA 612 0.5147 MEEEGNTSTQGRVMDSSTPAPAPAYRGVRKRTWGKWVSEIREPGKKTRIWLGSYEAPEMAAAAYDVAASYFRGQSAKLNFPEFGGVFPRPASSRAEDVRFAAQQAALMMKRPLRCQSTREAEEDAVTGPVPTTTTRVGLSASQIEAINEWPLDSPKMWMQMAEAPIMSGFDESMALYNNNDEDDQLLESTSWEDIEDSSIWHF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1456 203 Gene3D AP2/ERF domain 24 82 IPR036955 GO:0003700|GO:0006355
Acco08g1456 203 Pfam AP2 domain 23 73 IPR001471 GO:0003700|GO:0006355
Acco08g1456 203 CDD AP2 25 82 IPR001471 GO:0003700|GO:0006355
Acco08g1456 203 SMART rav1_2 24 86 IPR001471 GO:0003700|GO:0006355
Acco08g1456 203 PRINTS Ethylene responsive element binding protein signature 63 83 IPR001471 GO:0003700|GO:0006355
Acco08g1456 203 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Acco08g1456 203 SUPERFAMILY DNA-binding domain 24 81 IPR016177 GO:0003677
Acco08g1456 203 FunFam Ethylene-responsive transcription factor 2 23 82 - -
Acco08g1456 203 MobiDBLite consensus disorder prediction 1 25 - -
Acco08g1456 203 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Acco08g1456 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 19 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1456 Acco-ChrAcco08 17725089 17725700 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1456 24 174 AP2-EREBP Transcription Factor Family AT1G71450 50.323 5.54e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco08g1456 AP2 4.1e-12 CL0081