Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1453 ATGTCTTCTGATATCTCAAATGGGGCTTCATCTTCCCCATACAGAGGTGTACGCAAGAGAAAATGGGGCAAATGGGTGTCTGAAATCAGAGAGCCCGGCAAAAAGACCAGAATTTGGTTGGGCAGCTTCAAGACGTCGGAGATGGCTGCCGCGGCCTACGACGTCGCCGCGTTACACTTCCGGGGTCGTGACGCTAGGCTCAACTTCCCTGAGCTCGCCGGCAGCCTTCCCCGTCCGGCCAGTAATGATGCCGACGACATTCGCATGGCGGCACATGAGGCTGCCTTGACGCTGATCACGGCGGGGTCCGCCACATCTCTTGAGCAGTCTTCAGGTTCTGAGGCATCGCCGGTGATGGTCGGACTCTCGCCGACGCAGATTCAGGCAATCAATGAGATGCCGTTGGACTCGCCGAGGATGTGGATGCAAATGGCGGACTCAATGATGTTAGATGAAACGACGGCGTCTGTGTATGAGAATGACGAGGATATGCAAAGTGATTCCCTGTGGGATCCATAG 519 0.5568 MSSDISNGASSSPYRGVRKRKWGKWVSEIREPGKKTRIWLGSFKTSEMAAAAYDVAALHFRGRDARLNFPELAGSLPRPASNDADDIRMAAHEAALTLITAGSATSLEQSSGSEASPVMVGLSPTQIQAINEMPLDSPRMWMQMADSMMLDETTASVYENDEDMQSDSLWDP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1453 172 Pfam AP2 domain 14 62 IPR001471 GO:0003700|GO:0006355
Acco08g1453 172 CDD AP2 14 72 IPR001471 GO:0003700|GO:0006355
Acco08g1453 172 MobiDBLite consensus disorder prediction 1 20 - -
Acco08g1453 172 FunFam Ethylene-responsive transcription factor 2 12 71 - -
Acco08g1453 172 Gene3D AP2/ERF domain 13 71 IPR036955 GO:0003700|GO:0006355
Acco08g1453 172 SMART rav1_2 13 76 IPR001471 GO:0003700|GO:0006355
Acco08g1453 172 ProSiteProfiles AP2/ERF domain profile. 13 70 IPR001471 GO:0003700|GO:0006355
Acco08g1453 172 SUPERFAMILY DNA-binding domain 12 71 IPR016177 GO:0003677
Acco08g1453 172 PRINTS Ethylene responsive element binding protein signature 52 72 IPR001471 GO:0003700|GO:0006355
Acco08g1453 172 PRINTS Ethylene responsive element binding protein signature 14 25 IPR001471 GO:0003700|GO:0006355
Acco08g1453 172 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 10 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1453 Acco-ChrAcco08 17653836 17654354 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1453 12 172 AP2-EREBP Transcription Factor Family AT1G71450 60.947 2.62e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco08g1453 AP2 6.9e-13 CL0081