Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1424 ATGGATCCGTTTGATGATTTTTTATCAGAAGCTCCTGTTTCACGTACTAGGGTGGGTGGCAGGTTTATTCCAAAGGCCAAAGCTAAACAGAAAACTCGAAAGGAGATATCCACATCAAATCAAGCAACCTCATCTAATGATGGAAAGAATGAACATGTTGTTTCATCATCCACAAGCTCGGACACTGTAGGAAATGTTCCAATAAAAAGTATTAATCCAGTTGATTCAACTCCGGATAAATCAGCTACGGAATTTCTGAAATCCAGTTCACCAGTAGAAATCCCAGTTTTGGATAGTAATAAGACTGACCTGGAGAGTTCTCAACAAATTAATATGAGTGGATGCAATGCAGTATCGGTGGAAGCTCAACCTTCAATTATTGCAGCATCTGAGGTCAATAGTCATTGGTCTACCAATTTTCCAAATACAGCTAATGGGGCAGATCCTATTGGTTTTGGTGTGGGTCCAGTAGTTGGCACTGTTCCTGAGACTGACCTCCGTAATGCTAACTCAACCATTATTGAAGAACCTTCTGAATACCAGGAAGGTGAAGGTCCATTTCTTGATGGCATCAGAAGCTTGGAACCTGTTGATTCCTCGTTGCAAGTTGGTCCTGATGTGGAATCCCAAAGTGTTTCAGATTGTAAGGTTGCAAAGATGGAGACAAGTCATTCAAATTCTAACCTTGAGAGAGCAGGAGAGGTAGAGTCTGCTGAAGTTGAATTGGATCCTTTCAGAGACACTCTCCCTGATCCTGGTCTTAGGAATGCTCGTAAGTTTCAACCTAAGATCAAGCCTCGGCCTAGACTAGGGACTGCAGCGGTTGTTGCTTCTGCTTCATCTAATGATATGCTTGGGACAATCAATACATTAAGTGATACTGATAATTCATGCTCGAGGGTGCCATTGTCGGAGGACAAAAGAAGTTTGGGAATGGTAATTTCTTCTACATCAGAGCCTTCTACTGCCATGCTCTCAGAGGTTGACGTTCACAATGAGACTGGAGATTGGCCTTCTAACAGTGGAAAGCCAGCAGGAGAGACTACGGACATATTTTCTGTGTTGGAGACTTTCAGCCTTGATGACTTTCTCACACAAGACGGCTCTAGTGCAGGAAATCCAACTCTTCATTCTTTCCATGAGAAGGGAACAGAGAATTTTGTCACCCAGCCATGTGACATATCCCAAATTCAAAAGTTCCCTAACTATACGACCACTCACGATTCATTGACCTTCAAGGAAGATGCAGTCCTCAATGAGGATGATTCTTACACTGAGAATGGAAGGTTGGGAGCAGAGGAAGTAGGAGGATCAATGCCTGCCCATCCTCTTGATGAGACCCTTGATTATTCATCTATGAATAATGGGTCAGATCCAACTTTTCCAGTGTGCGAAGAACCACTTGAAGAACCGACAAATACAGCAAACAATCCTACTTGTGATGACCTTTTGCTTGTAGAAGATGTTCCTGGAGGAAAAGATGATGGTGGCTATAAAGAAAAAGATGCCATGATCTCCAGTTCTCCAAAAAATCGTACAGATTCTTCTGTAGTAGGTGAGACAGATAAAGTTGATAAACCTCGGAGGCAGGGGAGAAAGCGAGTTAATCTTAAACATGTCGATCCAGCAGAGAATGAGGATCCTGAGGAGGAGGATGAGTTTGACCCTACTTACTCTAACATTGATGAACTTGAAGAACACGATGATGAATATGGATTGAATGATGGATGCATGAAGAAAAAGAAGAAATCTGTAACAAAAAATGCAAAACCACGTCAAAAGCGTAAAAGGGCCAATGAGGATTTAGATAAAGCTACAAAAGAACCTCGTAAAAAATTCTTTCATTCAACCCAACGAAGAAAAAGATTTGTGGATAAGGCTTTGCTGGAAATTCCTGAGGATGAACTTAATCCTCAAACCTTGCGTATCAAGGATATTATACTGCTTGCAGAGTATAGGGAGCGACAAGCGAAAAAGGAGGCATCAGCATCAAAAACAACTTCGATTAATGGAAGAGATGGAGACTCACTTCATAAGGATTCTGCTCGTAATGAAGACATGTTAGGTTCAGAATATGGAAGAGGCTCAGATGATGATCAAGCCAATGAAAACGTTCCATTAGCTCCCACTTTATTCAATTACCAGTCTTTCATGGACAAAAAGCCTAGAGGAAAATGGTCGAAACAAGACACTGAACTGTTCTTTGGGGCTGTTCGCCAGTTTGGCACAGATTTTTCTTTGATACAACAACTTTTCCCCAGTCGAACACGCCATCAAATTAAGTTGAAGTACAAACAGGAAGAACGTCAACATCCTTTACTCCTATCTGATGCTATAAATAATCGCTCAAAAGATCTTTCTCATTTTAAAACGGTTTTTGAGCAGCTGCAACAAGCTTCTGCTAAGACAGAACAAGACACTAGTGACACCTCTGTTGGCATGACAGAGGAATTGGCGGACTTGATATCCGATCCTAATCCTAATGGAGGGGAACATGCAAAACTTGAGCAGGACGAAGCTGTGCAAAATCATCAGGAAGATAATGGGCCATCTCATAGTGCTGAAAAATCTGATGAAAATGATAATGATAACGAAGATGAAGATGACGATGATGATGACTTCCAAAGATGGTGTCAATATAAAAGCGATTATTAG 2655 0.4136 MDPFDDFLSEAPVSRTRVGGRFIPKAKAKQKTRKEISTSNQATSSNDGKNEHVVSSSTSSDTVGNVPIKSINPVDSTPDKSATEFLKSSSPVEIPVLDSNKTDLESSQQINMSGCNAVSVEAQPSIIAASEVNSHWSTNFPNTANGADPIGFGVGPVVGTVPETDLRNANSTIIEEPSEYQEGEGPFLDGIRSLEPVDSSLQVGPDVESQSVSDCKVAKMETSHSNSNLERAGEVESAEVELDPFRDTLPDPGLRNARKFQPKIKPRPRLGTAAVVASASSNDMLGTINTLSDTDNSCSRVPLSEDKRSLGMVISSTSEPSTAMLSEVDVHNETGDWPSNSGKPAGETTDIFSVLETFSLDDFLTQDGSSAGNPTLHSFHEKGTENFVTQPCDISQIQKFPNYTTTHDSLTFKEDAVLNEDDSYTENGRLGAEEVGGSMPAHPLDETLDYSSMNNGSDPTFPVCEEPLEEPTNTANNPTCDDLLLVEDVPGGKDDGGYKEKDAMISSSPKNRTDSSVVGETDKVDKPRRQGRKRVNLKHVDPAENEDPEEEDEFDPTYSNIDELEEHDDEYGLNDGCMKKKKKSVTKNAKPRQKRKRANEDLDKATKEPRKKFFHSTQRRKRFVDKALLEIPEDELNPQTLRIKDIILLAEYRERQAKKEASASKTTSINGRDGDSLHKDSARNEDMLGSEYGRGSDDDQANENVPLAPTLFNYQSFMDKKPRGKWSKQDTELFFGAVRQFGTDFSLIQQLFPSRTRHQIKLKYKQEERQHPLLLSDAINNRSKDLSHFKTVFEQLQQASAKTEQDTSDTSVGMTEELADLISDPNPNGGEHAKLEQDEAVQNHQEDNGPSHSAEKSDENDNDNEDEDDDDDDFQRWCQYKSDY 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1424 884 MobiDBLite consensus disorder prediction 569 618 - -
Acco08g1424 884 MobiDBLite consensus disorder prediction 234 248 - -
Acco08g1424 884 MobiDBLite consensus disorder prediction 221 259 - -
Acco08g1424 884 MobiDBLite consensus disorder prediction 820 884 - -
Acco08g1424 884 MobiDBLite consensus disorder prediction 594 612 - -
Acco08g1424 884 CDD SANT 725 766 IPR001005 -
Acco08g1424 884 MobiDBLite consensus disorder prediction 657 704 - -
Acco08g1424 884 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 884 - -
Acco08g1424 884 Gene3D - 726 791 - -
Acco08g1424 884 MobiDBLite consensus disorder prediction 1 88 - -
Acco08g1424 884 ProSiteProfiles SANT domain profile. 721 772 IPR017884 -
Acco08g1424 884 SUPERFAMILY Homeodomain-like 724 772 IPR009057 -
Acco08g1424 884 SMART sant 722 770 IPR001005 -
Acco08g1424 884 MobiDBLite consensus disorder prediction 35 88 - -
Acco08g1424 884 MobiDBLite consensus disorder prediction 431 556 - -
Acco08g1424 884 MobiDBLite consensus disorder prediction 487 507 - -
Acco08g1424 884 MobiDBLite consensus disorder prediction 831 859 - -
Acco08g1424 884 MobiDBLite consensus disorder prediction 672 698 - -
Acco08g1424 884 Pfam Myb DNA-binding like 716 800 IPR039467 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco08g1424 Myb_DNA-bind_7 4.6e-28 CL0123