Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1414 ATGGTAGCGGTGGGTTTCTCCTCAGTCGTTCCCAGGTTGAAGAGAGAAGAATGTAAACGAACAAAACACGATTCCAACTTCTCTGATTGGAAGATTCTCATTGGCCCTTCAGATTGGGATGACTATTCTAGAGGGAAGGAAGAGTCAGCTAGGTACAGAATTCATAACCTCCCAGAAAAATTGAGCCCAGGAGTTTATGAACTTGGTATTGCTGTATCTCGTACTGGTTTAGGGCGCAAGGTTTACAAGCTTGACCCAGACCGTATAGTTGTGGTTTACCTTGGAAAAGCTGACAATGTGAGAACAAGACTCCAGCAGTATGGCCGAACTGGAGCTCATTTGAGCAATAACTGTTCAACTTCTGATCCAGATAATAGTACTCCTGCTTGCACCCATAAAGGGAAGGGATTTTTTGAGGAAATTTTTTCACAAGGCTATCCAATTATTTATAGATGGGCTCCTATGCAAAGCAAGGAAGATGCCAAGAAAACGGAAAGTCAATTGCTCAGTGTATTTGATTATGCATGGAACACGAGCAATAATGGTACCCGGCGCCCTGATGATATTATTAAGAAGATTAATAAAGTTGCGTCAAGTCCTACAACATTTTCAAACATGGCCAAGCTGCTTCAACCTTTCACCCGGAAGCGAGTGGGTATCCGAATCAAATCAAGCAGCATGCCTTCCCCAGATGGCAAATTACAAGAAATAGACAGAGGCAGCTATAATTTCTTACCTCGAGTATTTAAAATTGGCAGATCAAATCCAAGGTTAGTTCAAGATGTCCCTGGAGTCATTCTGGACAATACTACAAGATTTTGTGGAGTGGTCTTGGGTGATGGTTCTATCTGTACAAGACCACCGGCTGAAAGAAGAATGAGGTGTGTAGAACACAAAGGAATGAGAATAAATGGGTCCACTTCTAAAAGGAGAATGAAATCAGAGAACAATCCAGACATAGAACTCAATGTGCCCTGTCATCTGAAGAGCGAAGGCTATGGTGAAGAACATGTTGGCCAAGATTTGAAAGACCCTTCCCATACTGCAGTTGAGAATCCTTTTGATGGTAGAATTACCAATACATGTGGAATCATTTTGAAAGATGGCACCCCTTGTAGGAGGCCACCTGTTAAAGGGAGAAAAAGGTGTTATGAGCATAAAGGGAAGAGAATCAATCATTTTAATAAAGCCCATTGCAATCTAGGAGGACAGAACACAAGATGA 1224 0.4199 MVAVGFSSVVPRLKREECKRTKHDSNFSDWKILIGPSDWDDYSRGKEESARYRIHNLPEKLSPGVYELGIAVSRTGLGRKVYKLDPDRIVVVYLGKADNVRTRLQQYGRTGAHLSNNCSTSDPDNSTPACTHKGKGFFEEIFSQGYPIIYRWAPMQSKEDAKKTESQLLSVFDYAWNTSNNGTRRPDDIIKKINKVASSPTTFSNMAKLLQPFTRKRVGIRIKSSSMPSPDGKLQEIDRGSYNFLPRVFKIGRSNPRLVQDVPGVILDNTTRFCGVVLGDGSICTRPPAERRMRCVEHKGMRINGSTSKRRMKSENNPDIELNVPCHLKSEGYGEEHVGQDLKDPSHTAVENPFDGRITNTCGIILKDGTPCRRPPVKGRKRCYEHKGKRINHFNKAHCNLGGQNTR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1414 407 SMART uri_9 77 182 IPR000305 -
Acco08g1414 407 Pfam GIY-YIG domain-containing protein 27 190 - -
Acco08g1414 407 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 356 394 IPR038909 GO:0003677|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1414 3 394 HRT Transcription Factor Family AT5G56780 41.500 6.76e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Acco08g1414 None None None