Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1395 ATGAAACTCTCTTTCTCTGTGCAATCAAAATCAAATTCCAAGTCAAACCCCATCAGGCCCTCCAACAAATTCAACGCCGCCGCTACCGATACCAAAGATGGAAACTCCAACGCGAGAGAGTATGTTACAGAGTTCGATGCTTCGAAATCCTCTTCTGATCCTAAAAAATCCACCATGGTTATTCCCCCTATTGAGAACGAGTGGAATATTGGAAGGTCCCACAAGAGGATGAAGAATCTAGACTTACCCATCACTGAATCTAATGGAACCGAGGTGGGATTTGAGCTGGATACGTCGACAGTTGTGGAACCCGGTTCGGACATGTCGTATGGTCTGAATCTTCGGCAGACAAAGAAGAATGATGGGGACGGTGAGAAACCTGCTGTTGGCAGTGGTGGTGAAAATCACGAAAGGTCGCGGCCTGTTTCTCTAGACTCTGTGGTGCTGCAGAAATTTAAAGATGATATGAAGAGATTACCGGACGATAGAGGTTTTGATGAGTTCGAAGACGTTGCTGTTGAGGGTTTTGGTGCAGCTTTGCTTGCTGGATACGGATGGCGTGAAGGAATGGGCATTGGAAAGAATGCGAAGGAGGATGTGAAAGTTGTACAGTATGAGAGGAGGACTGCCAAAGAAGGGTTGGGTTTTGTTAGTGATCATGCTCGTAAGCGGAGTTCAAAGGAGGAAGTGAAGAAACCTAAGGATTATGGTAGAGATAGTTCGTTCTTGGGGAAGGTTGTTAGAATAGTTGAGGGCAGAAATGCAGGTCTGAAGGGTAAAATTGTAGAAGTTGAAGATAAATGGGTTGTTTTAAAGCTTTCTAAGAGTGAAGAAGAAGTAAAAGTGGACCTTGGTGATTTTGTAGAACTGGGTTCTACTGAAGAAGAGAGGTTTTTGAAGAAATTGAAGGAGTTAAAGATTCAACATGCTGATAAAGATAGTGATTCAAGGAATAAACGCAGTAGAGATGAGGGAAGGAGAGGCCGAGATCATGCTGTAGTTGATGTTAAAAGAGATAGTAGGAAGGAAGAGCAGGCGAAGAAACAAGTTTCATGGCTTACAAGTCATATTCGGGTCAGAGTTATTAGCAAAAGTTTCAAAGGAGGGCGATTATATTTGAAGAAGGGGCAGGTATTGGACGTTGTCGGGCCTACGACTTGTGATATATCCATGGATGATAGCAAGGAGATCATCCAGGGGGTTTCCCAAGACTTTCTTGAGACTTCTATCCCTCGACGAGGGGGGCCAGTTCTTGTATTATATGGTAAACATAAAGGTGTTTATGGGAATCTAGTTGAGAGGGATTTGGACAAAGAAACGGCTGTTGTTAGAGATGCTGATACCCATGCGCTGGTCAATGTGCAGCTTGAACAAATTGCAGAGTTTATAGGGGATCCGAGTATCTTGGGATACTGA 1416 0.4386 MKLSFSVQSKSNSKSNPIRPSNKFNAAATDTKDGNSNAREYVTEFDASKSSSDPKKSTMVIPPIENEWNIGRSHKRMKNLDLPITESNGTEVGFELDTSTVVEPGSDMSYGLNLRQTKKNDGDGEKPAVGSGGENHERSRPVSLDSVVLQKFKDDMKRLPDDRGFDEFEDVAVEGFGAALLAGYGWREGMGIGKNAKEDVKVVQYERRTAKEGLGFVSDHARKRSSKEEVKKPKDYGRDSSFLGKVVRIVEGRNAGLKGKIVEVEDKWVVLKLSKSEEEVKVDLGDFVELGSTEEERFLKKLKELKIQHADKDSDSRNKRSRDEGRRGRDHAVVDVKRDSRKEEQAKKQVSWLTSHIRVRVISKSFKGGRLYLKKGQVLDVVGPTTCDISMDDSKEIIQGVSQDFLETSIPRRGGPVLVLYGKHKGVYGNLVERDLDKETAVVRDADTHALVNVQLEQIAEFIGDPSILGY 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1395 471 PANTHER G PATCH AND KOW-CONTAINING 1 467 IPR045166 GO:0000398
Acco08g1395 471 SMART G-patch_5 171 217 IPR000467 GO:0003676
Acco08g1395 471 Pfam KOW motif 244 269 IPR005824 -
Acco08g1395 471 MobiDBLite consensus disorder prediction 1 64 - -
Acco08g1395 471 Gene3D - 356 410 - -
Acco08g1395 471 ProSiteProfiles G-patch domain profile. 173 219 IPR000467 GO:0003676
Acco08g1395 471 MobiDBLite consensus disorder prediction 309 342 - -
Acco08g1395 471 MobiDBLite consensus disorder prediction 1 57 - -
Acco08g1395 471 MobiDBLite consensus disorder prediction 118 141 - -
Acco08g1395 471 SMART kow_9 410 437 IPR005824 -
Acco08g1395 471 SMART kow_9 240 267 IPR005824 -
Acco08g1395 471 MobiDBLite consensus disorder prediction 105 143 - -
Acco08g1395 471 Pfam G-patch domain 160 218 IPR026822 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1395 352 444 C2H2 Transcription Factor Family AT1G55460 35.484 5.41e-07 50.1