Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco08g1362 | ATGGGAGAATATGCTAATGGAGAGGAGACACTAACATTACAAGGTCAAGTTGTTGTATGGAAGTGCATGTTCGGTTTTGTTGATTCCATGGCCCTCAAATCCGCCGTGGAGCTCCGCATTCCCGACATTATCCACCGCCACGGAGGACCAATGTCCTTGTCACAAATCACCGCCTCCCTCTCCGACGCTCCCTCGCCCGACCCTGCCACCCTCGCTCGCATCATCAGGCTCCTCGTCCGCCGCAACATCTTCACCGCCCACCACCCCTCCGATGGCGGAGACACCCTCTACGGCCTCACCCACTCTTCCAGGTGGCTCCTGAATGACTCAGACCTGAACCTCGCTCCCGTGCTTCTCCTGCAAAACCATCCCACTCTTATGGCTCCGTGGCACTATCTGAGCCACTGCGTGAGAGAAGGTGGGCCCGCGTTCAAGAAGGCTCATGGCCGTGAGATCTGGGAGTTTGCATCAGAGAGCCCAGATTTCAACAAGCTTTTCAACGATGGGATGGCCTGTATGGCGAGGATGGTGATTATGGCGGTGTTATCGGCGTACAAGGAAGGGTTTGAGGGCATTGGATCGTTGGTGGATGTCGGAGGGAACACCGGACGGTCTTCGTCGGAGATAGTGAAATCGTATCCCCACATAAAGTGCATCAACTTCGATCTTCCTCATGTCATCGCCACCGCGCCTGAATACGACGGAGTCAGCCACGTCGGAGGAGATATGTTCCACTCCGTCCCTCCTGCTGATGCTGTTTTCATGAAGGTAAGAAATTGTTTGATACATATCTGA | 795 | 0.5447 | MGEYANGEETLTLQGQVVVWKCMFGFVDSMALKSAVELRIPDIIHRHGGPMSLSQITASLSDAPSPDPATLARIIRLLVRRNIFTAHHPSDGGDTLYGLTHSSRWLLNDSDLNLAPVLLLQNHPTLMAPWHYLSHCVREGGPAFKKAHGREIWEFASESPDFNKLFNDGMACMARMVIMAVLSAYKEGFEGIGSLVDVGGNTGRSSSEIVKSYPHIKCINFDLPHVIATAPEYDGVSHVGGDMFHSVPPADAVFMKVRNCLIHI | 264 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco08g1362 | 264 | Gene3D | - | 3 | 106 | IPR036388 | - | |
| Acco08g1362 | 264 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 20 | 264 | IPR016461 | GO:0008168 | |
| Acco08g1362 | 264 | PANTHER | O-METHYLTRANSFERASE | 13 | 257 | IPR016461 | GO:0008168 | |
| Acco08g1362 | 264 | Gene3D | Vaccinia Virus protein VP39 | 107 | 263 | IPR029063 | - | |
| Acco08g1362 | 264 | SUPERFAMILY | "Winged helix" DNA-binding domain | 11 | 110 | IPR036390 | - | |
| Acco08g1362 | 264 | Pfam | Dimerisation domain | 30 | 79 | IPR012967 | GO:0046983 | |
| Acco08g1362 | 264 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 111 | 256 | IPR029063 | - | |
| Acco08g1362 | 264 | Pfam | O-methyltransferase domain | 130 | 256 | IPR001077 | GO:0008171 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco08g1362 | Acco-ChrAcco08 | 15827469 | 15828263 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco08g1362 | 30 | 256 | Monolignol Biosynthesis Gene Families | AT5G54160 | 42.424 | 1.77e-58 | 188 |