Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1315 ATGACGCATCTATCGGAATCGAATATAGTTTATGACTTTTCCATAGTAAATCAAATCTCAAAAGATGCTGCTTCTGATAATTCGGTTTTGATTCTAAATAATGGTGAATTTGCAGGAGCAATTTGCTGGGGACCGGGAGAGGCAGTCAAGGTGGAAGAGATACAAGTATATCCTCCTAAAGCTTTTGAAGTTCGTCCCTGTTTTCCTCTAGCACTAGGGCATGAAGGTGTAGGTGTTGTGGAGAGCATAGGGGAAAAAGTGACGAATTTCAAAGGAGATGTGGTGATTCCTATATACGTTGGAGAATGTGGAGAATGTGAGAATTGTGTGTCGAAGGAATCAAACATTTGCCTGAGATATCCTTTAAGTGTGAGTGGCCTAATGCCTGATGGCACATCAAGGATTTCTGTTGGATGCCAAAAGGCATACCATGTTTTTAGCTGCTCAACATGGTGTGAGTATATGGTTAGTGATGAAAACTATCTAATGAAAGTTGATCCAAGTATTGATTTGGCTCATGCTAGCTTCATCTCTTGTGGATTCTCTACTGGTTTTGGAGCTTCTTGGAAGACAGCCCAAGTTCAAAGTGGATCATCTGTGGCTGTTTTCGGGCTTGGAGCTGTTGGATTAGGGGCAATAAGTGGAGCCAAGCTGATGGGAGCAACAAAGATAATCGGCATTGACATAAATGAGAAGAAGAGAGAAAAAGGAGAAGCTTTTGGAATGACAGATTTTATAAATCCAAGAGATCATTCTGATAAGCCTTCTTCTCAATTGGTGAAGGACCTCACCAATGGATTGGGTGTGGATTATGCTGTTGAGTGCACTGGTGTTGCCGCTTTGCTCACTCAAGCCCTAGAATCTACCAAAGTGGGGAAAGGAAAGGCAGTAGCAGTTGGTGCAGGAATCGAAGAATTTGTGCCAGTCAACTGGGTGGGTCTTCTTCTTGGAAGAACTTTGAAGGGTTCAATTTTTGGAGGCTTGAAACCCAAATCTGATCTTTCCACTGTGGCCACCAAATGCCAAAACAAGGAATTCCCTCTTGATGAGCTTTTCACCCATGAAGTCCCTTTGACAGAGATAAACAAAGCTTTTGAGTTCTTGAAACAGCCAGATTGTGTCAAAGTTATTATCAAGATGTGA 1143 0.4208 MTHLSESNIVYDFSIVNQISKDAASDNSVLILNNGEFAGAICWGPGEAVKVEEIQVYPPKAFEVRPCFPLALGHEGVGVVESIGEKVTNFKGDVVIPIYVGECGECENCVSKESNICLRYPLSVSGLMPDGTSRISVGCQKAYHVFSCSTWCEYMVSDENYLMKVDPSIDLAHASFISCGFSTGFGASWKTAQVQSGSSVAVFGLGAVGLGAISGAKLMGATKIIGIDINEKKREKGEAFGMTDFINPRDHSDKPSSQLVKDLTNGLGVDYAVECTGVAALLTQALESTKVGKGKAVAVGAGIEEFVPVNWVGLLLGRTLKGSIFGGLKPKSDLSTVATKCQNKEFPLDELFTHEVPLTEINKAFEFLKQPDCVKVIIKM 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1315 380 Pfam Alcohol dehydrogenase GroES-like domain 67 165 IPR013154 -
Acco08g1315 380 Pfam Zinc-binding dehydrogenase 207 330 IPR013149 -
Acco08g1315 380 FunFam S-(hydroxymethyl)glutathione dehydrogenase 184 323 - -
Acco08g1315 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Acco08g1315 380 Gene3D - 67 375 - -
Acco08g1315 380 SUPERFAMILY GroES-like 333 378 IPR011032 -
Acco08g1315 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 338 IPR036291 -
Acco08g1315 380 Gene3D - 184 323 - -
Acco08g1315 380 PANTHER ALCOHOL DEHYDROGENASE 66 372 - -
Acco08g1315 380 SUPERFAMILY GroES-like 38 193 IPR011032 -
Acco08g1315 380 CDD liver_alcohol_DH_like 40 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1315 Acco-ChrAcco08 14730951 14733792 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1315 68 340 Monolignol Biosynthesis Gene Families AT4G37990 27.437 1.25e-11 63.5