Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g1246 ATGCAGCAACATCAGCTCAAGAAGGCTATTAAAGAATCGGGTTTCTTCACTGAGTATGGGGATGCCAATAGATACAAGCTTCTTGAAGTTATAGGGAAGGGTAGCTATGGAGTTGTTTGTGCGGCAATTGACACACACACTGGAGAAAAAGTAGCAATAAAGAAGATCCATGATGTTTTTGACCATGCATCTGATGCCATTAGAATTCTTCGTGAAGTCAAATTACTCAGACTTTTAAGGCACCCTGATATTGTAGAAATCAAGCGGATAATGTTGCCACCTTCAAAGAGAGATTTTAAAGATATTTATGTAGTCTTTGAGCTCATGGAATCTGATCTCCATCAAGTCATTAAAGCTAATGATGATTTAACCCGTGAACATCATCAGTTTTTTCTTTATCAGCTCCTACGTGCATTGAAATATATGCATACAGCAAATGTGTATCACAGAGACCTCAAACCCAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAATTTGTGATTTAGGACTGGCAAGAGTTGCATTCAATGATGCTCCAACAACAATATTTTGGACAGATTATGTTGCTACTAGATGGTACAGAGCCCCAGAACTCTGTGGAGCATTCTCTTCTAAGTATACACCGGCTATTGATATATGGAGCATTGGCTGCATCTTTGCTGAGGTCCTCACTGGAAAGCCATTGTTTCCTGGTAAAAGTGTTGTACATCAAATAGATTTGATTACTGATCTTCTTGGGACCCCATCACCAGAAACTATTTCAGGAGTTCGAAATGAGAAGGCGAGAAGATACTTGATGGAAATGAGGAAAAAACGGCCCGTGCCTTTTGAGCAGAAATTTCCAAATGCTGATCCATTGGCACTTCGCCTTTTGCAAAGGCTTCTAGCATTTGATCCCAAAGATCGGCCAACCGCTGAAGAGGCACTGGCTGATCCTTATTTCAAGGGCTTGTCCAGAGTTGAGAGAGAACCTTCTTGTCAGTCAATTTCAAAGTTGGAATTCGAGTTTGAGAGGCGAAGGTTGACAAAGGAGGATATAAGAGAACTAATATATCGTGAAATACTGGAATATCACCCTCAAATGCTTAAAGATTACATGAGTGGAACTGAAGGCAACTTTCTCTATCCTAGTGCAATAGGCCAATTCAGAAAGGAATTTGTGTATCTCGAGGAAAATGGTGGCTCAGTCACTCCTCCAGGAAGGAGACATGTCTCCCTTCCAAGGCCCGCTGTTCACTCTGGCACAATCCCTCTAAATACAAATAAAATGCCAAATTTCAATTTGTATGAGAACAAGCAAAATGCAGAAGAGGCATCTAGGAGTTTGGGTAGTTGCCGGCCTCCACCAGGGGCACCAACAGCTAAGCCAGGGAGAGTGGTAGGCCCAGTTTTACCCTATGAAAATGGAAGAAGCACAAATACCTTTTATGACCTAAGGATCTTTTATCAAAATGCTCTTCCCCAACAAGCAGCTGGTTCTCCTAACTGCTTTTTTAGACCTCAACCCACAAACTCACAGATGATTGTATCAGAGACACACCAGGTATTTTCACAATACAAGCATCAAGTCCCATTCCAGCATTGTCACCATCTAAGCAGACCTGCGATTGACCTCAACACCAACCCGTATCACCAAGAAGTCAAGTTCGATCGGTTTGATAATCCCATGATTATGATGGATACCAGGCTGCTGCAGGCACAATCTCACTATGGTGCCGTTGGTGCTGCAGCAGTAGCCATTGCAGCTAATAGACATTCTGGTGCTGTACAGTATGGATTGTCATAG 1791 0.4204 MQQHQLKKAIKESGFFTEYGDANRYKLLEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFDHASDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKRDFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQLLRALKYMHTANVYHRDLKPKNILANANCKLKICDLGLARVAFNDAPTTIFWTDYVATRWYRAPELCGAFSSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQIDLITDLLGTPSPETISGVRNEKARRYLMEMRKKRPVPFEQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLSRVEREPSCQSISKLEFEFERRRLTKEDIRELIYREILEYHPQMLKDYMSGTEGNFLYPSAIGQFRKEFVYLEENGGSVTPPGRRHVSLPRPAVHSGTIPLNTNKMPNFNLYENKQNAEEASRSLGSCRPPPGAPTAKPGRVVGPVLPYENGRSTNTFYDLRIFYQNALPQQAAGSPNCFFRPQPTNSQMIVSETHQVFSQYKHQVPFQHCHHLSRPAIDLNTNPYHQEVKFDRFDNPMIMMDTRLLQAQSHYGAVGAAAVAIAANRHSGAVQYGLS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g1246 596 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Acco08g1246 596 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 363 - -
Acco08g1246 596 FunFam Mitogen-activated protein kinase 111 339 - -
Acco08g1246 596 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1246 596 MobiDBLite consensus disorder prediction 439 461 - -
Acco08g1246 596 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Acco08g1246 596 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1246 596 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Acco08g1246 596 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Acco08g1246 596 CDD STKc_TDY_MAPK 24 361 - -
Acco08g1246 596 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Acco08g1246 596 FunFam Mitogen-activated protein kinase 15 119 - -
Acco08g1246 596 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g1246 596 MobiDBLite consensus disorder prediction 399 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g1246 Acco-ChrAcco08 13652973 13658371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g1246 1 594 MAP Kinase Gene Family AT1G53510 66.401 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Acco08g1246 Pkinase 5.7e-66 CL0016